Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i07
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 33 0.20
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 32 0.36
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 32 0.36
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 32 0.36
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 32 0.36
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 31 0.62
Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 30 1.4
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 30 1.4
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 30 1.4
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 30 1.4
AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical ... 29 3.3
AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical ... 29 3.3
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z46241-5|CAA86321.1| 279|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +3
Query: 513 SRRLYLISQERFVKCSKRDAQKQALTR------ATRYSRYT--TPKERTGRHYRTDTRRF 668
S+R YL S+ R + S + + L+R A R+SR + T + R+GRH R+ +R
Sbjct: 295 SKRRYLRSRSRSLSKSPARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSP 354
Query: 669 RIPPPARGSQSRSDRR 716
P R S+SRS R
Sbjct: 355 PRKRPVRRSRSRSRSR 370
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 544
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 545 VRQMFEERRTKAGIDKSYPLQP 610
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 544
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 545 VRQMFEERRTKAGIDKSYPLQP 610
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 544
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 545 VRQMFEERRTKAGIDKSYPLQP 610
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 544
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 629 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 688
Query: 545 VRQMFEERRTKAGIDKSYPLQP 610
+Q ++ R GI K QP
Sbjct: 689 QQQ--QQSRQPQGIMKPTNAQP 708
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIASLYEAQQARALDRV--RQSPSNGVSTASPQQPTPVPHQPGK 544
Q RFQ Q Q ++++ + R +D + SP+ PQQP + QP +
Sbjct: 653 QTGGRFQTNQNQALDMQLQYAQQQAHQRQMDPSGGQHSPNAQPRQPQPQQPQQLQQQPSQ 712
Query: 545 VRQMFEERRTKAGIDKSYPLQP 610
+Q ++ R GI K QP
Sbjct: 713 QQQ--QQSRQPQGIMKPTNAQP 732
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 552 KCSKRDAQKQALTRATRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRR 716
K R ++ R++R SR +P++R R RR R PPP R S+S DRR
Sbjct: 81 KKKDRSRERDRERRSSR-SRSRSPRDRDRERRR---RRSRSPPPRRRSRSGGDRR 131
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 552 KCSKRDAQKQALTRATRYSRYTTPKERTGRHYRTDTRRFRIPPPARGSQSRSDRR 716
K R ++ R++R SR +P++R R RR R PPP R S+S DRR
Sbjct: 81 KKKDRSRERDRERRSSR-SRSRSPRDRDRERRR---RRSRSPPPRRRSRSGGDRR 131
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 353 GGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPH 532
GG++ Q Q QQ+QLQ++ + ++++ QQA+ + P + Q+ PVP+
Sbjct: 740 GGAQPTQQQIWQQQQQLQQQRM---AMFQQQQAQG--QQPGGPQQPMGQWPQQRQLPVPY 794
Query: 533 QPG 541
PG
Sbjct: 795 PPG 797
>Z68108-15|CAJ58502.1| 582|Caenorhabditis elegans Hypothetical
protein T05A10.1k protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 225 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 283
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 284 PSQQSQVQAQLQQQQQLQ 301
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +2
Query: 377 QARFQQKQLQERELKIASLYEAQ-QARALDRVRQSPSNGVSTASPQQPTPVPHQPGKVRQ 553
Q +FQQ+QLQ+++L+ L + Q Q + L + + +S A QQ H + Q
Sbjct: 202 QQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQ-QQAQQAQHVQSRQMQ 260
Query: 554 MFEERRTKAGIDKSYPLQ 607
++ + +A + + LQ
Sbjct: 261 PSQQSQVQAQLQQQQQLQ 278
>AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical
protein Y58G8A.4a protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 370 SNAGQIST--ETTTRKRIENSIALRSATGACLGPGEAISQQ 486
S+A IST TTT I N I S G+C+ EAI+ Q
Sbjct: 3 SSAATISTISTTTTPSTISNVITSHSNNGSCIQIAEAIAAQ 43
>AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical
protein Y58G8A.4b protein.
Length = 433
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 370 SNAGQIST--ETTTRKRIENSIALRSATGACLGPGEAISQQ 486
S+A IST TTT I N I S G+C+ EAI+ Q
Sbjct: 3 SSAATISTISTTTTPSTISNVITSHSNNGSCIQIAEAIAAQ 43
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 QMQARFQQKQLQERELKIA-SLYEAQQARALDRVRQSPSNGVSTASPQQPTPVPHQP 538
Q Q QQ++ Q RE + ++ QQ + + +Q P PQ P P QP
Sbjct: 224 QQQREQQQREQQHREHQARLQQHQQQQQQQQQQQQQRPPQPQPQPQPQPPQRPPQQP 280
>Z46241-5|CAA86321.1| 279|Caenorhabditis elegans Hypothetical
protein C38D4.7 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 326 VISTRMEKGGGSRLLQMQARFQQKQLQERELKIASLYEAQQARALDRVRQSPSNGVSTAS 505
++ + E R ++ + R ++++ ER + A ++RV +S ++
Sbjct: 98 MLKAQEEARADQRSIREEHRAEREKADERSQQNMDKMMALVHSLVERVDRSHASSYDVVG 157
Query: 506 PQQPTPVPHQPGK------VRQMFEERRTKAGIDKSYPLQPIHNTERTN 634
+ P+ +P K VRQ +RT A +D + L+ I + E N
Sbjct: 158 QKNPSSSSLKPAKRVKSAVVRQSNLAKRTGAPVDAAKELKKIRDEENRN 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,066
Number of Sequences: 27780
Number of extensions: 274356
Number of successful extensions: 1074
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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