Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2i03
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 31 0.18
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.40
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 29 0.94
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.94
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 29 0.94
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 29 0.94
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 28 1.2
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 28 1.2
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 27 2.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.9
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 27 3.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.8
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 3.8
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 5.0
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 5.0
SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces ... 26 5.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.0
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 8.7
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 25 8.7
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 31.1 bits (67), Expect = 0.18
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 539 AISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLG 718
A+ AT T S+NP T I N + K F+ PP++++ P +L P+S
Sbjct: 683 ALPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPE 740
Query: 719 MAKGVSP 739
AK V P
Sbjct: 741 YAKTVIP 747
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.9 bits (64), Expect = 0.40
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 530 PSPAISATSTRSSN---PRFHTPTTPDLTSIS-INPLTPY*KEFAPGLKP 667
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 28.7 bits (61), Expect = 0.94
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +2
Query: 524 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 703
+PPS A+ + + P P P + + NP TP+ P + A + L
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303
Query: 704 PSSLGMAKGVSPPY 745
P G+ G PY
Sbjct: 304 P---GLKNGSDYPY 314
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.94
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2
Query: 527 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 688
PP PA ++++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +1
Query: 271 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVT 450
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 451 VEGGNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 591
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 527 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 706
PP PA ++++ SS+P + +T TS SI P P + PP S+ + S P
Sbjct: 316 PPPPASTSSTGTSSSP-LPSTSTSCTTSTSIPPTGNSTTPVTPTV-PPTSTSSTSTPPPP 373
Query: 707 SSLGMAKGVSPP 742
+S S P
Sbjct: 374 ASTSSTGTSSSP 385
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Frame = +1
Query: 283 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVE 456
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 457 GGNVLATPSSSRITIGGLALMHQATLPCDLGYI----NPIIKSPIPYTN 591
V +TP ++ ++ + +T Y P+ +P+ TN
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 531
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 40 SAASAIPSLVDAFSSSKPPQTDTPP 114
S S+ PSL + +S PP T TPP
Sbjct: 158 STVSSTPSLNHSLQNSMPPSTPTPP 182
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 0.94
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 271 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTA 441
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 442 DVTVEGGNVLATPSSS 489
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 224 LLNV*SSLFNACTSILPAPKPNRTVSLCNHYQTSPPS*KAT 346
+L V S +++A TS LP+ V+L Q SPPS K T
Sbjct: 131 VLFVNSGMWSASTSFLPSSFAMNMVTLALSAQLSPPSTKRT 171
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = +2
Query: 533 SPAISATSTRSS-NPRFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSA 694
SP +SA S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 695 YL 700
YL
Sbjct: 344 YL 345
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 4 DLFMEEIVPLVVSAASAIPSLVDAFSSSKPPQTD 105
D+F + +P++ ++A IPSL A SK P T+
Sbjct: 241 DIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 253 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVN 366
R+Y L T ++S + PN S + +GY + A+L+N
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLIN 2878
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 533 SPAISATSTRSSNPRFHTPTTPDLTSIS 616
S IS +ST N FH PT TS S
Sbjct: 801 SRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 334 IKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 423
+K RD YL NLEA FPS+ +KI +T+D
Sbjct: 378 LKTRRDQYLTNLEA--FPSSLFMKI-LTLD 404
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = +2
Query: 521 IKPPSPAISATSTRSSNPRFHTP----TTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 688
+ +P S+T+ +S P + +TP +S ++N TP P++S
Sbjct: 1578 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1637
Query: 689 SAYLTPSSLGMAKGVSPP 742
TP + A SPP
Sbjct: 1638 LNSSTPITSSTALNTSPP 1655
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +2
Query: 551 TSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKG 730
TST ++ +TP +S +N TP A PP++S TP +
Sbjct: 1616 TSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVN 1675
Query: 731 VSPP 742
S P
Sbjct: 1676 TSTP 1679
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 533 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 712
S + TST ++ +TP +S +N TP A P++S + TP +
Sbjct: 1718 SSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT 1777
Query: 713 LGMAKGVSPP 742
A S P
Sbjct: 1778 SSTALNTSTP 1787
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 524 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 703
+PPSP I R+S F +PT S+ + + G+ P SS A A+L+
Sbjct: 494 RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHSTSSSSGISPSHSS-ASLAHLS 552
Query: 704 PSS 712
+S
Sbjct: 553 QAS 555
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 539 AISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 712
A+ ++ S F PTT S+SI+P K A +P + ++ S TP++
Sbjct: 69 AVETNASASHETSFALPTTSPAASLSISPT----KSAAVSSEPNVEADVKSLSSTPAA 122
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 94 GVWKKRKHRPRREWPKRQKRLKAQF 20
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 115 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 20
+A + + WKK + + EW K ++ KA++
Sbjct: 123 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 154
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 115 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 20
+A + + WKK + + EW K ++ KA++
Sbjct: 134 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 165
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 115 QAGYQSEGVWKKRKHRPRREWPKRQKRLKAQF 20
+A + + WKK + + EW K ++ KA++
Sbjct: 145 KAREEDKAEWKKAREEDKAEWKKAREEDKAEW 176
>SPBC106.08c |mug2||DUF1773 family protein 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 46 ASAIPSLVDAFSSSKPPQTDTPPARSMD 129
A+ P++V F + PQ D PP R+++
Sbjct: 211 ATGYPAIVVPFLNGSLPQADLPPLRTIE 238
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 5.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +2
Query: 536 PAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 715
P I S+ SS P P P + PL P + P PP APS P L
Sbjct: 325 PPIGNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPP---PPPPRSAPSTGRQPPPL 379
Query: 716 GMAKGVSPP 742
++ VS P
Sbjct: 380 SSSRAVSNP 388
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 521 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY*KEFAPG--LKPPLSSEAPSA 694
I+ S + TS S++ ++ +TP+ S + LTP + L+ PL +PSA
Sbjct: 294 IRSHSTNTTITSVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSA 353
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 514 LMHQATLPCDLGYINPIIKSPIPYTNHP 597
+ HQA L C GY + + +P+ N P
Sbjct: 348 ICHQAILRCIYGYYHNLSLEELPFINVP 375
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,894,680
Number of Sequences: 5004
Number of extensions: 57280
Number of successful extensions: 302
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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