Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h23
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...   254   8e-68
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...   254   8e-68
AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...    55   1e-07
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...    55   1e-07
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...    44   2e-04
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...    44   2e-04

>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score =  254 bits (622), Expect = 8e-68
 Identities = 118/181 (65%), Positives = 146/181 (80%)
 Frame = +3

Query: 111 MVRKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANK 290
           MVRKLKFHE KLLKKVDFI+WK+DN   E K++++F IQKREDYTKYNKLSR+IRELA +
Sbjct: 1   MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60

Query: 291 IKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMS 470
           I  LD +  F+TE++  LL KL+ +G+   +  L  A  +SAS FCRRRLPV+MV+ +MS
Sbjct: 61  IAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMS 120

Query: 471 ETIKEATKFIEQGHVRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFD 650
           E +K AT  IE GHVRVGPE++KDPAFLV+R+LEDFVTWVDGS I++HVL YN+MRDDF 
Sbjct: 121 EHLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQ 180

Query: 651 M 653
           M
Sbjct: 181 M 181


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score =  254 bits (622), Expect = 8e-68
 Identities = 118/181 (65%), Positives = 146/181 (80%)
 Frame = +3

Query: 111 MVRKLKFHEGKLLKKVDFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANK 290
           MVRKLKFHE KLLKKVDFI+WK+DN   E K++++F IQKREDYTKYNKLSR+IRELA +
Sbjct: 1   MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60

Query: 291 IKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMS 470
           I  LD +  F+TE++  LL KL+ +G+   +  L  A  +SAS FCRRRLPV+MV+ +MS
Sbjct: 61  IAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMS 120

Query: 471 ETIKEATKFIEQGHVRVGPEVVKDPAFLVNRSLEDFVTWVDGSAIRKHVLEYNEMRDDFD 650
           E +K AT  IE GHVRVGPE++KDPAFLV+R+LEDFVTWVDGS I++HVL YN+MRDDF 
Sbjct: 121 EHLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQ 180

Query: 651 M 653
           M
Sbjct: 181 M 181


>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +3

Query: 195 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 374
           E+K++ ++ ++ + +  +       IR+ A ++  LD  +E R      LL +L +IG++
Sbjct: 29  ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88

Query: 375 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 551
             +R  L     +    F  RRL   + +  ++++I  A   I Q H+RV  +VV  P+F
Sbjct: 89  DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 148

Query: 552 LV 557
           +V
Sbjct: 149 VV 150


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
 Frame = +3

Query: 195 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 374
           E+K++ ++ ++ + +  +       IR+ A ++  LD  +E R      LL +L +IG++
Sbjct: 29  ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88

Query: 375 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVRVGPEVVKDPAF 551
             +R  L     +    F  RRL   + +  ++++I  A   I Q H+RV  +VV  P+F
Sbjct: 89  DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 148

Query: 552 LV 557
           +V
Sbjct: 149 VV 150


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +3

Query: 195 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 374
           E+K++ ++ ++ + +  +       IR+ A ++  LD  +E R      LL +L +IG++
Sbjct: 29  ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88

Query: 375 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVR 518
             +R  L     +    F  RRL   + +  ++++I  A   I Q H+R
Sbjct: 89  DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +3

Query: 195 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 374
           E+K++ ++ ++ + +  +       IR+ A ++  LD  +E R      LL +L +IG++
Sbjct: 29  ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88

Query: 375 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSETIKEATKFIEQGHVR 518
             +R  L     +    F  RRL   + +  ++++I  A   I Q H+R
Sbjct: 89  DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,768,880
Number of Sequences: 53049
Number of extensions: 583389
Number of successful extensions: 1733
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)