Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h22
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...   165   4e-41
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...   165   4e-41
BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p pro...    29   6.0  
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    29   7.9  

>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score =  165 bits (402), Expect = 4e-41
 Identities = 78/162 (48%), Positives = 100/162 (61%)
 Frame = +3

Query: 195 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 374
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 375 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 554
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 555 VLISFILIYFDSVSIIFYPPLMAWVVSVSISRVLAERHYLLD 680
             +         + IIF  P+ AW VSV+ISR++ +RHY+LD
Sbjct: 122 FFVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILD 163


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score =  165 bits (402), Expect = 4e-41
 Identities = 78/162 (48%), Positives = 100/162 (61%)
 Frame = +3

Query: 195 RQTPPMLKKILQYDVQITKTFVDRALKITALKSLRNHSQLLEISCHGIVWLAGWLTFIWL 374
           R + P LK +L+ DVQ++K FV     ++  KSLR HS+ LEISC GI W   W+ FIWL
Sbjct: 2   RTSSPALKYLLEKDVQVSKHFVVAVSNLSFFKSLRIHSRFLEISCDGIAWFVSWIAFIWL 61

Query: 375 FNSKDLYQLQVNMXXXXXXXXXXXXXXXXFVRRRRPVPMNKLMEVGPDKFSFPSGHASRA 554
            +SK LYQ+QVNM                 VRRRRPV    ++ +GPDKFSFPSGHASRA
Sbjct: 62  LSSKSLYQMQVNMLFGLILDVVIVAVLKALVRRRRPVASKDMLTIGPDKFSFPSGHASRA 121

Query: 555 VLISFILIYFDSVSIIFYPPLMAWVVSVSISRVLAERHYLLD 680
             +         + IIF  P+ AW VSV+ISR++ +RHY+LD
Sbjct: 122 FFVLLFFAKLYPLHIIFLMPVTAWAVSVAISRLILQRHYILD 163


>BT024276-1|ABC86338.1|  141|Drosophila melanogaster IP14648p
           protein.
          Length = 141

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +3

Query: 537 GHASRAVLISFILIYFDSVSIIFYPPLMAWVVSVSISRVL 656
           GHA+RA+++  I+I    V+I+    L+A +V+  ++R+L
Sbjct: 16  GHAARAIVLIVIIILLVVVAILRIIVLVAVIVATILARLL 55


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = +3

Query: 492 NKLMEVGPDKFSFPSGHASRAVLISFILIYFDSVSIIFYPPL-------MAWVVSVSISR 650
           N  +EV PD+F  P  +      I  + +Y D V ++ YP         M W++   +  
Sbjct: 24  NCFVEVLPDQFIIPRKYVELGESIRSLPVYQDDVWMVSYPRTGSTWAQEMVWLLGHQLDY 83

Query: 651 VLAERHYLLDS 683
           V AE+   L S
Sbjct: 84  VAAEQDLRLRS 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,945,335
Number of Sequences: 53049
Number of extensions: 590457
Number of successful extensions: 1134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)