Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h17
         (184 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   2.3  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    21   6.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    21   6.9  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 5    ESNAPATEGSTVDYGL*KKKINSYLFKLILMNINLNY 115
            +   P    STVD  +  + +N  L + +L  I+LN+
Sbjct: 1361 DQGIPTPLSSTVDLIVYVRDVNDNLPQFLLKEISLNF 1397


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 66  IFFFYNP*STVDPSVAGAF 10
           IFFF    S ++P + GAF
Sbjct: 456 IFFFGMSNSLINPLIYGAF 474


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 66  IFFFYNP*STVDPSVAGAF 10
           IFFF    S ++P + GAF
Sbjct: 457 IFFFGMSNSLINPLIYGAF 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,295
Number of Sequences: 2352
Number of extensions: 2187
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 39
effective length of database: 472,251
effective search space used:  9917271
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)