Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h08
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   1.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = -2

Query: 273 KYMYN*LNSIFLYLQFSFCSANVIASDNGTRPCNIKANNFNKLLCNVVLSL 121
           + M N L  I+ Y  F F          GT        NF  +   ++LS+
Sbjct: 311 RQMKNNLERIYFYWSFGFLIIQRFIHQIGTLEVAFTGKNFFSITRGLILSI 361


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 70  LNYLTSVYIFNLARNPIKLF 11
           ++YL +VY+  +  NP+ L+
Sbjct: 131 IDYLFTVYLLPIIINPLVLY 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,472
Number of Sequences: 336
Number of extensions: 1098
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)