Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h08
         (343 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0370 + 15030829-15030837,15031579-15031957,15033434-150336...    29   0.72 
04_03_0381 - 15163425-15164903                                         28   2.2  
04_03_0380 - 15150814-15152304                                         28   2.2  
04_03_0369 + 15012906-15014417                                         28   2.2  
04_03_0348 + 14735581-14737071                                         28   2.2  
04_03_0347 + 14723118-14724548                                         28   2.2  
04_03_0323 - 14364145-14365656                                         28   2.2  
11_02_0146 + 8779249-8780130,8780815-8780970,8781070-8781265,878...    27   5.1  
08_02_0607 + 19285580-19286138,19286734-19287668                       27   5.1  
04_03_0354 + 14830325-14830826,14831491-14832416                       27   5.1  
04_03_0353 - 14785648-14787213                                         27   5.1  
02_04_0351 + 22249117-22249624,22249710-22250674                       26   6.7  

>04_03_0370 +
           15030829-15030837,15031579-15031957,15033434-15033626,
           15033859-15034102,15035383-15035445
          Length = 295

 Score = 29.5 bits (63), Expect = 0.72
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+   + FAEQ+ NC+YK+ E+
Sbjct: 32  VPMLSWLFFAEQQTNCRYKQTEW 54


>04_03_0381 - 15163425-15164903
          Length = 492

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 392 VPMLSWPFFAEQQTNCRYKRTEW 414


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0369 + 15012906-15014417
          Length = 503

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0347 + 14723118-14724548
          Length = 476

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 376 VPMLSWPFFAEQQTNCRYKRTEW 398


>04_03_0323 - 14364145-14365656
          Length = 503

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 VPLSDAITFAEQKLNCKYKKIEF 253
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>11_02_0146 +
           8779249-8780130,8780815-8780970,8781070-8781265,
           8781574-8781599
          Length = 419

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 38  IKDVDASQVIQKYNRFKHHMFVISK 112
           I DVD+   +Q+ N+F HH+ +  K
Sbjct: 64  INDVDSFYSVQQLNKFVHHLLLHRK 88


>08_02_0607 + 19285580-19286138,19286734-19287668
          Length = 497

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 209 FAEQKLNCKYKKIEF 253
           FAEQ+ NC+YK+ E+
Sbjct: 417 FAEQQTNCRYKRTEW 431


>04_03_0354 + 14830325-14830826,14831491-14832416
          Length = 475

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 209 FAEQKLNCKYKKIEF 253
           FAEQ+ NC+YK+ E+
Sbjct: 395 FAEQQTNCRYKRTEW 409


>04_03_0353 - 14785648-14787213
          Length = 521

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 209 FAEQKLNCKYKKIEF 253
           FAEQ+ NC+YK+ E+
Sbjct: 441 FAEQQTNCRYKRTEW 455


>02_04_0351 + 22249117-22249624,22249710-22250674
          Length = 490

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 209 FAEQKLNCKYKKIEF 253
           FAEQ+ NC+YK +E+
Sbjct: 405 FAEQQTNCRYKCVEW 419


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,819,118
Number of Sequences: 37544
Number of extensions: 83445
Number of successful extensions: 187
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)