Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h08
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    26   0.34 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   5.5  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         22   7.2  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 182 DPVILKLTILTNYCAM*CSLFGSLY*LQTC 93
           DP+ILKL I+T Y      + G LY L TC
Sbjct: 303 DPLILKLFIITTY------ISGILYYLSTC 326


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -2

Query: 282 LNSKYMYN*LNSIFLYLQFSFCSANVIASDNGTRPCNIKANN 157
           LNS ++Y   +S  L  Q S    N   +++ T   N+  NN
Sbjct: 353 LNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGNN 394


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -1

Query: 139 QCSALSSVHFTDYKHVMLKSIIFLNYLTSV 50
           +C+   + H     H ++++++ LN+ T V
Sbjct: 368 ECNFPLNAHMNATNHAIVQTLVHLNHPTKV 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,937
Number of Sequences: 2352
Number of extensions: 3763
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)