Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2h08
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anem...    29   2.1  
AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-P...    29   2.1  
AY070924-1|AAL48546.1|  665|Drosophila melanogaster RE02962p pro...    27   8.4  
AE014298-2245|AAF48524.1|  665|Drosophila melanogaster CG9020-PA...    27   8.4  

>AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anemia
           complementationgroup D2 protein protein.
          Length = 1478

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 133 SALSSVHFTDYKHVMLKSIIFLNYLTSVYIFNLARNPIKL 14
           +++ +  FT +  ++L  +I +N   S+YI N+ R  IKL
Sbjct: 403 ASVPAAEFTSFDMILLLLLIHVNEDNSLYIENILRRRIKL 442


>AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-PA
           protein.
          Length = 1478

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 133 SALSSVHFTDYKHVMLKSIIFLNYLTSVYIFNLARNPIKL 14
           +++ +  FT +  ++L  +I +N   S+YI N+ R  IKL
Sbjct: 403 ASVPAAEFTSFDMILLLLLIHVNEDNSLYIENILRRRIKL 442


>AY070924-1|AAL48546.1|  665|Drosophila melanogaster RE02962p
           protein.
          Length = 665

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 29  SGEIKDVDASQVIQKYNRFKHHMFVISKVNRREST 133
           SGE  DVD  Q+  +  + K+ +F++ K    EST
Sbjct: 30  SGEQLDVDLVQLQIENKKLKNRLFILKKSIAEEST 64


>AE014298-2245|AAF48524.1|  665|Drosophila melanogaster CG9020-PA
           protein.
          Length = 665

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 29  SGEIKDVDASQVIQKYNRFKHHMFVISKVNRREST 133
           SGE  DVD  Q+  +  + K+ +F++ K    EST
Sbjct: 30  SGEQLDVDLVQLQIENKKLKNRLFILKKSIAEEST 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,355,443
Number of Sequences: 53049
Number of extensions: 156384
Number of successful extensions: 331
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)