Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g23
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1YMT7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_UPI0000D5630B Cluster: PREDICTED: similar to CG7323-PA;...    34   3.4  
UniRef50_A1ZXI7 Cluster: Putative uncharacterized protein; n=2; ...    33   6.0  

>UniRef50_Q1YMT7 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 299

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = +2

Query: 164 LPRILR*DSVYL-R*RWYVWCPFNMQRANGRHVNGPRRTMD-QLHRIQ*RHAL--IIQCI 331
           LP I+R  + +L   RW+  C + + R+ GR V+GP   M  +L  +  RH L  I+   
Sbjct: 33  LPGIVRAPARWLVAPRWHAACAYVVGRSGGRVVDGPFEGMKLRLSAVSSRHLLGYILGTQ 92

Query: 332 P*EIHVVCEQFI*NGY 379
             E+H V E  I  GY
Sbjct: 93  ELELHGVVEDIIARGY 108


>UniRef50_UPI0000D5630B Cluster: PREDICTED: similar to CG7323-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG7323-PA - Tribolium castaneum
          Length = 1625

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 315 LLSSAYLKKYMSCVSSLFEMDTRVDWSMLQKSVYEDINNEEYDYIPE 455
           L+S     ++   + SL E D  V ++ L    Y+ +NN +YDY+P+
Sbjct: 264 LISEEKESEWKQSLQSLVETDVSVSYNDLSYVDYDALNNIQYDYLPD 310


>UniRef50_A1ZXI7 Cluster: Putative uncharacterized protein; n=2;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 207

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 30  DDKIYPSHKFLLQRNVRVQFMNIVKKSEWCETLTIKFQKALNNLGFLG 173
           ++KI  SH+ LL++N + +F N V  ++  +  TI  +   N L FLG
Sbjct: 77  ENKIMDSHEVLLRKNTKGKFNNSVGITQILDKSTILVENQSNELCFLG 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,377,362
Number of Sequences: 1657284
Number of extensions: 11252174
Number of successful extensions: 26938
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26934
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)