Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2g18
(294 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 161 3e-39
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 160 5e-39
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 153 7e-37
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 143 8e-34
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 120 6e-27
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 116 8e-26
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 111 4e-24
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 107 5e-23
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 97 7e-20
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 95 3e-19
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 93 1e-18
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 75 4e-13
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 73 2e-12
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 72 2e-12
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 68 5e-11
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 66 1e-10
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 64 7e-10
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 63 1e-09
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 58 4e-08
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 56 1e-07
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 52 2e-06
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 52 3e-06
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 50 1e-05
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 48 4e-05
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 48 5e-05
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 46 1e-04
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 46 1e-04
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 44 5e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 44 9e-04
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 44 9e-04
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 43 0.001
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 42 0.003
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 42 0.003
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 41 0.005
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 40 0.008
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 39 0.024
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 38 0.032
UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7; Mollicu... 38 0.056
UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1; Fusoba... 32 2.1
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 2.8
UniRef50_UPI0000E497C8 Cluster: PREDICTED: hypothetical protein;... 31 4.9
UniRef50_A1GEI6 Cluster: Glutamate--cysteine ligase, GCS2; n=2; ... 31 4.9
UniRef50_Q0BYY9 Cluster: FeS assembly protein SufD; n=1; Hyphomo... 31 6.4
UniRef50_A7TTD0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_A6RD53 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 6.4
UniRef50_Q8G3X0 Cluster: PtsG; n=5; Bifidobacterium|Rep: PtsG - ... 30 8.5
UniRef50_Q9XUD4 Cluster: Putative uncharacterized protein abt-3;... 30 8.5
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 161 bits (391), Expect = 3e-39
Identities = 75/81 (92%), Positives = 78/81 (96%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI
Sbjct: 40 DLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEI 99
Query: 184 VKQITSINIEPGVEVEVTIAD 246
VK+ITSINIEPGVEVEVTIA+
Sbjct: 100 VKKITSINIEPGVEVEVTIAN 120
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 160 bits (389), Expect = 5e-39
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 180
ADLI GAK++ L+VKGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSE
Sbjct: 37 ADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSE 96
Query: 181 IVKQITSINIEPGVEVEVTIADA 249
IVKQITSI+IEPGVEVEVTIADA
Sbjct: 97 IVKQITSISIEPGVEVEVTIADA 119
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 153 bits (371), Expect = 7e-37
Identities = 72/80 (90%), Positives = 77/80 (96%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 186
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 187 KQITSINIEPGVEVEVTIAD 246
KQITSI++EPGVEVEVTIA+
Sbjct: 463 KQITSISLEPGVEVEVTIAN 482
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 143 bits (346), Expect = 8e-34
Identities = 66/81 (81%), Positives = 77/81 (95%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 180
+DL+N AK ++LRVKGPVR+PTKIL+ITTRKTP GEGSKTW+ ++MRIHKR+IDLHSPSE
Sbjct: 37 SDLVNRAKDKQLRVKGPVRLPTKILKITTRKTPNGEGSKTWETYEMRIHKRLIDLHSPSE 96
Query: 181 IVKQITSINIEPGVEVEVTIA 243
IVKQITSI+IEPGVEVEVTIA
Sbjct: 97 IVKQITSIHIEPGVEVEVTIA 117
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 120 bits (289), Expect = 6e-27
Identities = 55/79 (69%), Positives = 63/79 (79%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 186
LI AK Q LRVKGPVRMPTK+LR+TTRKTPCGEGSKTWDRFQ+RIHKRVIDL S E
Sbjct: 40 LIKKAKDQNLRVKGPVRMPTKVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEAT 99
Query: 187 KQITSINIEPGVEVEVTIA 243
Q+ I +EPGV +V ++
Sbjct: 100 LQLKHIYLEPGVNCDVIVS 118
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 116 bits (280), Expect = 8e-26
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 180
A++ KK+ ++VKGPVR+PTK LRITTRKTPCGEGSKTWD +QMRI+KRV+ + + E
Sbjct: 37 AEVKENGKKKGVQVKGPVRIPTKTLRITTRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPE 96
Query: 181 IVKQITSINIEPGVEVEVTIAD 246
VK+ITS+ +EPGVE+EV + D
Sbjct: 97 TVKEITSLKVEPGVELEVAMFD 118
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 111 bits (266), Expect = 4e-24
Identities = 45/82 (54%), Positives = 66/82 (80%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE 180
+ L+ A+ +K+ + GPVR+PT+ L+ITTRKTPCG G+ TWD F+++I+KR+IDLH+P+E
Sbjct: 34 SQLLTRARDEKVTIHGPVRLPTRTLKITTRKTPCGNGTNTWDTFELKIYKRIIDLHAPTE 93
Query: 181 IVKQITSINIEPGVEVEVTIAD 246
VK+ITS +E GV+V +TI D
Sbjct: 94 QVKKITSFTMESGVDVSITILD 115
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 107 bits (257), Expect = 5e-23
Identities = 49/81 (60%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 ADLINGAKK-QKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS 177
+++++ AKK +++ VKGPVRMPTK L IT RK+PCGEGSKTWDRF+MRI+KR+IDL
Sbjct: 36 SEIVSRAKKTEQVEVKGPVRMPTKTLVITVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNV 95
Query: 178 EIVKQITSINIEPGVEVEVTI 240
VK IT+ I+PGVE+E+T+
Sbjct: 96 PDVKTITNFRIDPGVEIELTM 116
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 97.1 bits (231), Expect = 7e-20
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +1
Query: 43 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 222
KGPVRMPTK L++T RK+PCGEGSKTWDRF+MRIHKRVID K IT+ I PG+
Sbjct: 55 KGPVRMPTKHLKMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGI 114
Query: 223 EVEVTI 240
VE+ +
Sbjct: 115 NVELNV 120
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 94.7 bits (225), Expect = 3e-19
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
+L+ KK L V+GP+ MP + LRITTR+ PCG G++T+D F++RI+KRVID +E
Sbjct: 42 NLMGKLKKGNLEVRGPIPMPRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEA 101
Query: 184 VKQITSINIEPGVEVEVTI 240
VKQ+T I +EP V VEV++
Sbjct: 102 VKQVTQIALEPDVHVEVSV 120
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 93.1 bits (221), Expect = 1e-18
Identities = 35/79 (44%), Positives = 55/79 (69%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+F+M+IHKR+ID HS
Sbjct: 34 EIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDKFEMKIHKRIIDFHSNKSE 93
Query: 184 VKQITSINIEPGVEVEVTI 240
IT IN++ G+E++ I
Sbjct: 94 FNSITPINLDNGIEIDAQI 112
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 74.5 bits (175), Expect = 4e-13
Identities = 30/79 (37%), Positives = 53/79 (67%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
D+ AKK ++V+GP+ +PT+ L +T R+ P G+G T+D ++MRIHKRV+D+ +
Sbjct: 41 DITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGYHTYDHWEMRIHKRVVDMDADERA 100
Query: 184 VKQITSINIEPGVEVEVTI 240
++Q+ + I V+VE+ +
Sbjct: 101 LRQLMRLRIPEDVKVEIEL 119
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 72.5 bits (170), Expect = 2e-12
Identities = 29/74 (39%), Positives = 48/74 (64%)
Frame = +1
Query: 19 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 198
A K + + GPV +PT+ + + RK P GEGS+TWD ++MR+HKR+ID+ + ++QI
Sbjct: 31 ANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWDHWEMRVHKRLIDISADERALRQIM 90
Query: 199 SINIEPGVEVEVTI 240
I + V +E+ +
Sbjct: 91 RIQVPRDVNIEIVL 104
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 72.1 bits (169), Expect = 2e-12
Identities = 26/71 (36%), Positives = 51/71 (71%)
Frame = +1
Query: 22 KKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITS 201
K+ +R+KGP +P K L I TRK+PCG G++T+++++MR+H+R+ID+ + + ++++
Sbjct: 29 KRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKWEMRMHRRIIDISADDKTIRRLID 88
Query: 202 INIEPGVEVEV 234
+ I V +E+
Sbjct: 89 LKIPDDVHLEL 99
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 67.7 bits (158), Expect = 5e-11
Identities = 29/74 (39%), Positives = 49/74 (66%)
Frame = +1
Query: 19 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQIT 198
A++ + V+GPV +P K L I+T + P GEG+K +D ++MRIHKR+ID+ ++++ I
Sbjct: 30 AERSGVEVRGPVPLPVKRLEISTLRLPHGEGTKVFDHWEMRIHKRLIDVELNDKVMRNIM 89
Query: 199 SINIEPGVEVEVTI 240
I + V +E+ I
Sbjct: 90 RIRVPSNVYIEIQI 103
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 66.5 bits (155), Expect = 1e-10
Identities = 23/76 (30%), Positives = 48/76 (63%)
Frame = +1
Query: 13 NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQ 192
N A+K ++V GP+ +PT + + + P GEG K W+ ++M++HKR+ID+ + +++Q
Sbjct: 26 NMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWEHWEMKVHKRIIDIAADERVMRQ 85
Query: 193 ITSINIEPGVEVEVTI 240
+ + + V +E+ +
Sbjct: 86 LMRVRVPDDVYIEIEL 101
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 63.7 bits (148), Expect = 7e-10
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +1
Query: 40 VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIE-P 216
+ GP R P + L ITTRK+PCGEG+ TW RF++R++KR + + I S + P
Sbjct: 53 ISGPCRAPVRRLTITTRKSPCGEGTNTWHRFELRMYKRTFWVTCGGNDISTILSKTVVIP 112
Query: 217 GVEVEVTIAD 246
G++V V + +
Sbjct: 113 GIQVTVEVEE 122
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 62.9 bits (146), Expect = 1e-09
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 133 QMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 249
+M+IH ++IDL SPSEIVKQITS++IEP VE EVTIADA
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEVEAEVTIADA 71
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 58.0 bits (134), Expect = 4e-08
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +1
Query: 22 KKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 189
K+ ++++GP+ +PTKILR+ + G+K WD +QMRIH+R+ID+ + +K
Sbjct: 28 KQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDTYQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 56.0 bits (129), Expect = 1e-07
Identities = 24/81 (29%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-E 180
+++ A++ +V GP+ +PT+I R T ++P + K+ ++F++R HKR++D+ P+ +
Sbjct: 24 EIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSREQFEVRTHKRMLDILEPTQQ 82
Query: 181 IVKQITSINIEPGVEVEVTIA 243
V Q+ +++ GV+VE+ ++
Sbjct: 83 TVDQLMKLDLSAGVDVEIKLS 103
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS- 177
A ++ K+ ++GP+ MPTKI R T K+P + ++F++RIH R++D+ + +
Sbjct: 21 AAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDSREQFEIRIHARMLDIVAATP 79
Query: 178 EIVKQITSINIEPGVEVEV 234
+ V +T +++ P V VEV
Sbjct: 80 DTVDSLTKLDLAPEVSVEV 98
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 51.6 bits (118), Expect = 3e-06
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHS-PSE 180
+++ AK+ V GP+ +PT++ R T K+P + K+ ++FQ+ +HK +++L S +
Sbjct: 22 EIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSREQFQLAVHKCLLELSSFNAH 80
Query: 181 IVKQITSINIEPGVEVEVTIAD 246
++ T+ + GV++ V + D
Sbjct: 81 LLSTFTNFQLPAGVDISVEVRD 102
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 50.0 bits (114), Expect = 1e-05
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE- 180
D++ AK+ +V GP+ +PTK R T +P D++++R HKR+ID+ P++
Sbjct: 24 DIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARDQYEIRTHKRLIDIVDPTDK 82
Query: 181 IVKQITSINIEPGVEVEVTI 240
V + +++ GV+V++++
Sbjct: 83 TVDALMKLDLAAGVDVQISL 102
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 48.0 bits (109), Expect = 4e-05
Identities = 20/78 (25%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SE 180
D++ AK+ + GP+ +PT + T ++P K+ ++F++R H+R+ID+ +P S+
Sbjct: 33 DIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSREQFEIRTHRRLIDILNPTSK 91
Query: 181 IVKQITSINIEPGVEVEV 234
+ + ++ + GV++++
Sbjct: 92 TIDALKTLTLPAGVDIKI 109
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 47.6 bits (108), Expect = 5e-05
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEI 183
++ AK + RV GPV +PTK ++P + + F+ R H R+ID+H P ++
Sbjct: 59 ILEAAKATEARVSGPVPLPTKRRIFCVLRSP-HVNKDSREHFETRTHHRLIDVHQPTAQT 117
Query: 184 VKQITSINIEPGVEVEVTI 240
+ + ++ + GV+VE+ +
Sbjct: 118 IDALMALELPSGVDVEIKL 136
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/79 (26%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EI 183
++ AK+ + GP+ +PT+ T ++P + + ++F+MR HKR+ID+ +P+ +
Sbjct: 25 IVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSREQFEMRTHKRLIDIVNPTPKT 83
Query: 184 VKQITSINIEPGVEVEVTI 240
V + +++ GV++E+ +
Sbjct: 84 VDSLMKLDLPSGVDIEIKL 102
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSE- 180
+++ AK+ +V GP+ MPT+I R +P D++++R +KR+ID+ P++
Sbjct: 24 EIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARDQYEIRTYKRLIDIVQPTDK 82
Query: 181 IVKQITSINIEPGVEVEVTI 240
V + +++ GV+V++ +
Sbjct: 83 TVDALMKLDLAAGVDVQIAL 102
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 44.4 bits (100), Expect = 5e-04
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 ADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD-RFQMRI 144
ADLI GAK++ L+VKGPVRMPTK+ ++ + + C + W+ +FQ RI
Sbjct: 37 ADLIRGAKEKNLKVKGPVRMPTKV-QLESYISQC--AAVCWESKFQHRI 82
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 58 MPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEV 234
+P K+ ITT + P G+G+K W R++M +H R L + ++ K + + P VE+ +
Sbjct: 57 LPKKVESITTLRNPSGQGTKKWSRYKMIVHLRNFYLEATHQQLEKVVQFLRNFPHVEINL 116
Query: 235 TI 240
+I
Sbjct: 117 SI 118
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 43.6 bits (98), Expect = 9e-04
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EI 183
++ AK+ V GP+ +PT+ I T + + ++F+MR HKR+ID+ +P+ +
Sbjct: 25 IVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQT 83
Query: 184 VKQITSINIEPGVEVEVTI 240
V + +++ GV++E+ +
Sbjct: 84 VDSLMRLDLPSGVDIEIKL 102
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 INGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVK 189
I+ K+ ++ GP+ +P K + ++P + K+ ++F+MR +R+I LH + +
Sbjct: 25 IDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQFEMRTSRRLIVLHDLTPTMM 83
Query: 190 Q-ITSINIEPGVEVEVTIAD 246
Q +T ++ GVEV++ + +
Sbjct: 84 QMLTGLSFSAGVEVDLKVKE 103
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 41.9 bits (94), Expect = 0.003
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIV 186
+I ++ +VKGP+ +PTK T ++P + ++F+ R H+R+I L + +E
Sbjct: 24 IIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSREQFERRTHQRLIILLNTTEKT 82
Query: 187 KQ-ITSINIEPGVEVEVTI 240
K+ + +I I GV++++T+
Sbjct: 83 KEYLKNIIIPSGVDIQITL 101
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 41.5 bits (93), Expect = 0.003
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EI 183
+I A + GP+ +PTK ++P + + F+ R H+R+ID++SPS +
Sbjct: 29 IIETADQTAATAIGPIPLPTKRKIYCVLRSPHVDKDSR-EHFETRTHRRIIDIYSPSAKT 87
Query: 184 VKQITSINIEPGVEVEVTI 240
+ + +++ GV++EV +
Sbjct: 88 IDALMKLDLPSGVDIEVKL 106
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHS-PSE 180
+++ K+ VKGPV +PT+ ++P + + F++R H R+ID+ S SE
Sbjct: 31 NVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSREHFEIRSHFRIIDISSCSSE 89
Query: 181 IVKQITSINIEPGVEVEV 234
++ + +++ GV +E+
Sbjct: 90 TIEMLMRLDLPTGVNIEI 107
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 40.3 bits (90), Expect = 0.008
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVID-LHSPSEI 183
+++ A+ + GPV +PTK K+P + F++R H+R+ID L+ ++
Sbjct: 114 ILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQT 172
Query: 184 VKQITSINIEPGVEVEVTI 240
+ + +++ GV+VEV +
Sbjct: 173 IDSLMQLDLPAGVDVEVKL 191
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 38.7 bits (86), Expect = 0.024
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 40 VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLH-SPSEIVKQITSINIEP 216
V GP+ +PT RI T K+ ++F++ +KR+ID++ S ++ V + + +
Sbjct: 35 VSGPIPLPTH-KRIFTVNRSTFVNKKSREQFELSSYKRLIDIYSSTAKTVDALMKLELPS 93
Query: 217 GVEVEVTI 240
GVEVE+ +
Sbjct: 94 GVEVEIKV 101
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 38.3 bits (85), Expect = 0.032
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +1
Query: 7 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHS 171
L N Q L++ GP+ +PTKI +IT ++P + K+ ++F++R + + I + S
Sbjct: 26 LKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KKSREQFEIRTYTKTIQIES 79
>UniRef50_Q98PX9 Cluster: 30S ribosomal protein S10; n=7;
Mollicutes|Rep: 30S ribosomal protein S10 - Mycoplasma
pulmonis
Length = 103
Score = 37.5 bits (83), Expect = 0.056
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 AKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPS-EIVKQI 195
A K+K+ GP+ +PTK I T K+ ++F+ R +KR I ++P + V+ +
Sbjct: 29 ASKEKIDYSGPIPLPTK-REIFTILRSVHVNKKSREQFERRTYKRFIVFNNPGPKFVEIL 87
Query: 196 TSINIEPGVEVEVTI 240
+ GVEVE +
Sbjct: 88 KRTEMPAGVEVEFKV 102
>UniRef50_Q7P3J2 Cluster: SSU ribosomal protein S10P; n=1;
Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep:
SSU ribosomal protein S10P - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 78
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/53 (30%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +1
Query: 58 MPTKILRITT-RKTPCGEGSKTWDRFQMRIHKRVIDL-HSPSEIVKQITSINI 210
+PT+I + T R + S+ ++F+MR+H+R+I+L +S + + +TS+++
Sbjct: 3 LPTRIRKYTVLRSLHVNKDSR--EQFEMRVHRRMIELVNSTDKAISSLTSVHL 53
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 55 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRV 156
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_UPI0000E497C8 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 552
Score = 31.1 bits (67), Expect = 4.9
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +1
Query: 13 NGAKKQKLRVKGPVRMPTKILRITTRKTP-CGEGSKTWDRFQMRIHKRVIDLHS-PS--- 177
N AK +L + MPTK I T + P E K D F ++ H+RV+ + PS
Sbjct: 453 NLAKNMELNIFDNYAMPTKATLIHTIQKPGTPEKEKVRD-FTLQTHERVLQIQDLPSMTA 511
Query: 178 EIVKQITSINIEPGVEVEV 234
+ ++ +N+ GV++++
Sbjct: 512 PLFTELLQLNLPEGVQMKI 530
>UniRef50_A1GEI6 Cluster: Glutamate--cysteine ligase, GCS2; n=2;
Salinispora|Rep: Glutamate--cysteine ligase, GCS2 -
Salinispora arenicola CNS205
Length = 411
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 151 RVIDLHSPSEIVKQITSINIEPGVEVEVTIA 243
R +D+ SP++ ++ +S+ +EPG +VEV+ A
Sbjct: 69 RTLDITSPAQPLRYGSSVTVEPGGQVEVSTA 99
>UniRef50_Q0BYY9 Cluster: FeS assembly protein SufD; n=1; Hyphomonas
neptunium ATCC 15444|Rep: FeS assembly protein SufD -
Hyphomonas neptunium (strain ATCC 15444)
Length = 401
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -2
Query: 266 IGGSAYASAMVTSTSTPGSMLIEVICFTISEGECRSITLL 147
+GG+A++++++ T PG+ L V+ +GE ++IT L
Sbjct: 174 LGGAAFSASLIEFTLQPGARLNRVVYQRGGKGEAQAITAL 213
>UniRef50_A7TTD0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 218
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 34 LRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVI 159
+R+ GP +PT+ R T K+P + +K+ + F+ HKR++
Sbjct: 93 MRLTGPKPLPTRRERWTVIKSPFAQ-AKSKENFERHTHKRLV 133
>UniRef50_A6RD53 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 419
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 52 VRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDL 165
V M +L ++KTP GE K W +++ R +++DL
Sbjct: 325 VNMLALLLSNLSQKTPLGEALKFWQQYRQRRIDKILDL 362
>UniRef50_Q8G3X0 Cluster: PtsG; n=5; Bifidobacterium|Rep: PtsG -
Bifidobacterium longum
Length = 791
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 187 SQFQRESVGRSLS--CGFASENDPRSLNLHHKEFYGW*YAGSWLACGLGPLHAASVSWL 17
S ++ +VG L+ G SE ++LHH+ Y W AG C G + +A + WL
Sbjct: 466 SAMRQTAVGALLAGLLGGVSELSLYGIHLHHRRVYRWLLAG----CAAGGVTSAVLGWL 520
>UniRef50_Q9XUD4 Cluster: Putative uncharacterized protein abt-3; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein abt-3 - Caenorhabditis elegans
Length = 1431
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 290 FFIFQKYFIGGSAYASAMVTSTSTPGSMLIEVICFT 183
F+ F YF+ Y +A + +T T GS+L+ V C T
Sbjct: 955 FYSFLLYFVS-LVYLTASLINTPTKGSLLLYVFCLT 989
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,275,743
Number of Sequences: 1657284
Number of extensions: 5533682
Number of successful extensions: 13709
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 13522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13693
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 9929495642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -