Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g18
         (294 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   1.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   1.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   3.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   6.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       19   8.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   8.4  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 34 LRVKGPVRMPT 66
          +RVK P+RMPT
Sbjct: 1  MRVKHPLRMPT 11


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 34 LRVKGPVRMPT 66
          +RVK P+RMPT
Sbjct: 1  MRVKHPLRMPT 11


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 3.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 121 RSLNLHHKEFYGW 83
           + LN+   EF+GW
Sbjct: 202 KELNMIFNEFFGW 214


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 6.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 61  ACGLGPLHAASVS 23
           +CG  P+HA  +S
Sbjct: 348 SCGYDPMHAQELS 360


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 265 LAALPTRRRWSPQPLH 218
           L+  P RRR S  P H
Sbjct: 179 LSQSPNRRRASSNPCH 194


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 282 FSKIFYWRLCLRVGDGHLNLYTGL 211
           F+KIF W L    G   L L + L
Sbjct: 170 FNKIFGWSLIFLFGRIVLQLLSSL 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,614
Number of Sequences: 336
Number of extensions: 1402
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5216393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)