Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g18
         (294 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   1.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   3.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   4.1  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    22   5.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   7.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   7.2  

>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 227 TSTPGSMLIEVICFTISEGECRSITLLWIR 138
           +S+P +     +C+ +SE E   I +L+ R
Sbjct: 79  SSSPRTRQFRSVCYYVSESEMEKIEMLFAR 108


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 160 RSLSCGFASENDPRSLNLHHKEFYGW 83
           R   C    E + R  N++ +EFY W
Sbjct: 377 RYAECSKRKEQN-RMFNINEREFYNW 401


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 QITSINIEPGVEVEVTIAD 246
           Q+ S+N  PG E  +TIA+
Sbjct: 722 QLNSLNRGPGAENVITIAE 740


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 13  NGAKKQKLRVKGPVRMPTKILRIT 84
           N  K+ KLR +    MPTK  R+T
Sbjct: 337 NPEKQAKLRAELRTIMPTKDTRLT 360


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 151  RVIDLHSPSEIVKQITSINIEPGVEV 228
            RV+DLH   + V ++ ++    G E+
Sbjct: 1687 RVVDLHPGKDGVTRVVTLKCANGKEI 1712


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 226  PLHRARC*LR*SVSQFQRESVGR 158
            P H  R  L  S S  +R SVGR
Sbjct: 936  PRHSERALLSDSTSSSERNSVGR 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,784
Number of Sequences: 2352
Number of extensions: 6062
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18253998
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)