Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g18
         (294 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   161   1e-40
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   161   1e-40
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   161   1e-40
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   159   4e-40
AF022713-4|AAD09150.2|  777|Drosophila melanogaster putative ser...    27   5.4  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  161 bits (391), Expect = 1e-40
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query: 4   DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
           DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI
Sbjct: 40  DLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEI 99

Query: 184 VKQITSINIEPGVEVEVTIAD 246
           VK+ITSINIEPGVEVEVTIA+
Sbjct: 100 VKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  161 bits (391), Expect = 1e-40
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query: 4   DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
           DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI
Sbjct: 40  DLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEI 99

Query: 184 VKQITSINIEPGVEVEVTIAD 246
           VK+ITSINIEPGVEVEVTIA+
Sbjct: 100 VKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  161 bits (391), Expect = 1e-40
 Identities = 75/81 (92%), Positives = 78/81 (96%)
 Frame = +1

Query: 4   DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
           DLINGAK Q LRVKGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI
Sbjct: 40  DLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEI 99

Query: 184 VKQITSINIEPGVEVEVTIAD 246
           VK+ITSINIEPGVEVEVTIA+
Sbjct: 100 VKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  159 bits (387), Expect = 4e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = +1

Query: 4   DLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEI 183
           DLINGAK Q LRV+GPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEI
Sbjct: 40  DLINGAKNQNLRVEGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEI 99

Query: 184 VKQITSINIEPGVEVEVTIAD 246
           VK+ITSINIEPGVEVEVTIA+
Sbjct: 100 VKKITSINIEPGVEVEVTIAN 120


>AF022713-4|AAD09150.2|  777|Drosophila melanogaster putative
           serine-enriched protein protein.
          Length = 777

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 145 HKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 243
           H+R+ +L  P  + +++T  + E  VEVE T A
Sbjct: 247 HERLRELQEPEVVKEEVTEKDAEAEVEVEQTDA 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,404,104
Number of Sequences: 53049
Number of extensions: 257900
Number of successful extensions: 675
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 506778984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)