Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g14
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK025499-1|BAB15155.1|  872|Homo sapiens protein ( Homo sapiens ...    34   0.56 
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei...    32   1.7  
BC009354-1|AAH09354.2|  948|Homo sapiens RAB6IP1 protein protein.      32   1.7  
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.     32   1.7  
AY696295-1|AAU10524.1|  292|Homo sapiens cytochrome P450 protein.      30   6.9  
AK097373-1|BAC05026.1|  340|Homo sapiens protein ( Homo sapiens ...    30   6.9  

>AK025499-1|BAB15155.1|  872|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21846 fis, clone HEP01887. ).
          Length = 872

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 170 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 343
           FL    FA+ + DNK   + DD E  V R +++ V   RL +NVR P+LR S+Y     +
Sbjct: 160 FLETQMFASFI-DNKIMCHDDDDEDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 217

Query: 344 E 346
           +
Sbjct: 218 D 218


>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
           protein.
          Length = 1287

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 170 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 343
           FL    FA+ + DNK   + DD +  V R +++ V   RL +NVR P+LR S+Y     +
Sbjct: 575 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 632

Query: 344 E 346
           +
Sbjct: 633 D 633


>BC009354-1|AAH09354.2|  948|Homo sapiens RAB6IP1 protein protein.
          Length = 948

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 170 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 343
           FL    FA+ + DNK   + DD +  V R +++ V   RL +NVR P+LR S+Y     +
Sbjct: 236 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 293

Query: 344 E 346
           +
Sbjct: 294 D 294


>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
          Length = 1359

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 170 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 343
           FL    FA+ + DNK   + DD +  V R +++ V   RL +NVR P+LR S+Y     +
Sbjct: 647 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 704

Query: 344 E 346
           +
Sbjct: 705 D 705


>AY696295-1|AAU10524.1|  292|Homo sapiens cytochrome P450 protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 32  SVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNIL 184
           S Q  +F+  N ++  HQF E+V     + +KD +  +T    R  FL+IL
Sbjct: 240 SSQGQIFSKFNQEL--HQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288


>AK097373-1|BAC05026.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40054 fis, clone TBAES2000315, weakly similar to
           CYTOCHROME P450 4A1 (EC 1.14.15.3). ).
          Length = 340

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 32  SVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNIL 184
           S Q  +F+  N ++  HQF E+V     + +KD +  +T    R  FL+IL
Sbjct: 240 SSQGQIFSKFNQEL--HQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,504,196
Number of Sequences: 237096
Number of extensions: 1124445
Number of successful extensions: 2668
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2668
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)