Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g07
         (782 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese supe...   304   7e-83
BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p pro...   304   7e-83
AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA...   304   7e-83
L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide ...   303   1e-82
X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide dis...   209   3e-54
AY118586-1|AAM49955.1|  868|Drosophila melanogaster LD44919p pro...    29   9.5  
AY069093-1|AAL39238.1|  669|Drosophila melanogaster GH11272p pro...    29   9.5  
AE014298-2017|AAF48359.2|  669|Drosophila melanogaster CG1839-PA...    29   9.5  
AE013599-2412|AAF57909.1|  868|Drosophila melanogaster CG8950-PA...    29   9.5  

>L34276-1|AAA28694.1|  217|Drosophila melanogaster manganese
           superoxide dismutase protein.
          Length = 217

 Score =  304 bits (747), Expect = 7e-83
 Identities = 132/202 (65%), Positives = 166/202 (82%)
 Frame = +1

Query: 127 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 306
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 307 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLSTASVA 486
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 487 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 666
           VQGSGWGWLG+NK+  KLQ+A   NQDPL+A+TGL+PLFGIDVWEHAYYLQYKNVR  YV
Sbjct: 134 VQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYV 193

Query: 667 KAIFDVANWNDISQRYEKSAQV 732
           +AI+D+ANW+DIS R++++ ++
Sbjct: 194 EAIWDIANWDDISCRFQEAKKL 215


>BT004505-1|AAO42669.1|  217|Drosophila melanogaster GH02759p
           protein.
          Length = 217

 Score =  304 bits (747), Expect = 7e-83
 Identities = 132/202 (65%), Positives = 166/202 (82%)
 Frame = +1

Query: 127 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 306
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 307 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLSTASVA 486
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 487 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 666
           VQGSGWGWLG+NK+  KLQ+A   NQDPL+A+TGL+PLFGIDVWEHAYYLQYKNVR  YV
Sbjct: 134 VQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYV 193

Query: 667 KAIFDVANWNDISQRYEKSAQV 732
           +AI+D+ANW+DIS R++++ ++
Sbjct: 194 EAIWDIANWDDISCRFQEAKKL 215


>AE013599-2339|AAF57955.1|  217|Drosophila melanogaster CG8905-PA
           protein.
          Length = 217

 Score =  304 bits (747), Expect = 7e-83
 Identities = 132/202 (65%), Positives = 166/202 (82%)
 Frame = +1

Query: 127 ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDT 306
           A R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   
Sbjct: 14  AVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTK 73

Query: 307 IINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLSTASVA 486
           +I LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VA
Sbjct: 74  LIQLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVA 133

Query: 487 VQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYV 666
           VQGSGWGWLG+NK+  KLQ+A   NQDPL+A+TGL+PLFGIDVWEHAYYLQYKNVR  YV
Sbjct: 134 VQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYV 193

Query: 667 KAIFDVANWNDISQRYEKSAQV 732
           +AI+D+ANW+DIS R++++ ++
Sbjct: 194 EAIWDIANWDDISCRFQEAKKL 215


>L18947-1|AAA20533.1|  217|Drosophila melanogaster Mn-superoxide
           dismutase protein.
          Length = 217

 Score =  303 bits (745), Expect = 1e-82
 Identities = 131/200 (65%), Positives = 165/200 (82%)
 Frame = +1

Query: 133 RQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTII 312
           R KHTLP+LPY+Y ALEP+I REIM LHH KHH TY+NNLN AEE+L +A++K D   +I
Sbjct: 16  RGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLI 75

Query: 313 NLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLSTASVAVQ 492
            LAPAL+FNGGGHINH+IFW NLSPN  +PSD L KA+E  + S +  K +L+T +VAVQ
Sbjct: 76  QLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQ 135

Query: 493 GSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADYVKA 672
           GSGWGWLG+NK+  KLQ+A   NQDPL+A+TGL+PLFGIDVWEHAYYLQYKNVR  YV+A
Sbjct: 136 GSGWGWLGFNKKSGKLQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEA 195

Query: 673 IFDVANWNDISQRYEKSAQV 732
           I+D+ANW+DIS R++++ ++
Sbjct: 196 IWDIANWDDISCRFQEAKKL 215


>X64062-1|CAA45418.1|  143|Drosophila melanogaster superoxide
           dismutase (Mn type) protein.
          Length = 143

 Score =  209 bits (511), Expect = 3e-54
 Identities = 91/143 (63%), Positives = 114/143 (79%)
 Frame = +1

Query: 187 VISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSI 366
           +I REIM LHH KHH TY+NNLN AEE+L +A++K D   +I LAPAL+FNGGGHINH+I
Sbjct: 1   IICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTI 60

Query: 367 FWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLQI 546
           FW NLSPN  +PSD L KA+E  + S +  K +++T +VAVQGSGWGWLG+NK+  KLQ+
Sbjct: 61  FWQNLSPNKTQPSDDLKKAIESQWKSLEEFKKEVTTLTVAVQGSGWGWLGFNKKSGKLQL 120

Query: 547 ATCQNQDPLQATTGLVPLFGIDV 615
           A   NQDPL+A+TGL+PLFGIDV
Sbjct: 121 AALPNQDPLEASTGLIPLFGIDV 143


>AY118586-1|AAM49955.1|  868|Drosophila melanogaster LD44919p
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 22/95 (23%), Positives = 33/95 (34%)
 Frame = +3

Query: 363 DLLAQPVTKWWQAF*CSHQSR*ERLWILG*HKESTVDSFCGSTGLRLGLAWLQQTNEEIA 542
           D +  P   W +   C  Q       I    K   +  FC      L     QQ   E A
Sbjct: 432 DTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQQGRHEEA 491

Query: 543 NSYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQE 647
              + +PG + G   I   L  RC+  + +  ++E
Sbjct: 492 VQALEQPGEAEGQPLIARLLYERCVMLQQIGRIEE 526


>AY069093-1|AAL39238.1|  669|Drosophila melanogaster GH11272p
           protein.
          Length = 669

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 762 IGLTDF-FEIIHLSAFFISLRYIIPVGYIENSFHVVGTNVLVLKIVRVLPYID 607
           I LTD  FEI+     ++ L+ +  VG++  +F+ +  + L+   + + PY D
Sbjct: 324 ICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLLYAEISLKPYWD 376


>AE014298-2017|AAF48359.2|  669|Drosophila melanogaster CG1839-PA
           protein.
          Length = 669

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -3

Query: 762 IGLTDF-FEIIHLSAFFISLRYIIPVGYIENSFHVVGTNVLVLKIVRVLPYID 607
           I LTD  FEI+     ++ L+ +  VG++  +F+ +  + L+   + + PY D
Sbjct: 324 ICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLLYAEISLKPYWD 376


>AE013599-2412|AAF57909.1|  868|Drosophila melanogaster CG8950-PA
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 22/95 (23%), Positives = 33/95 (34%)
 Frame = +3

Query: 363 DLLAQPVTKWWQAF*CSHQSR*ERLWILG*HKESTVDSFCGSTGLRLGLAWLQQTNEEIA 542
           D +  P   W +   C  Q       I    K   +  FC      L     QQ   E A
Sbjct: 432 DTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLKQQGRHEEA 491

Query: 543 NSYMPEPGSSAGHHWIGPALRNRCMGARVLSSVQE 647
              + +PG + G   I   L  RC+  + +  ++E
Sbjct: 492 VQALEQPGEAEGQPLIARLLYERCVMLQQIGRIEE 526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,532,358
Number of Sequences: 53049
Number of extensions: 828702
Number of successful extensions: 2091
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2091
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)