Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g07
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.60 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.60 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.60 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   3.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.8  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 391 HLVTGCAKRSSG*CDHH 341
           H VTGC +R+ G C H+
Sbjct: 128 HPVTGCGERTEGRCLHY 144


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 391 HLVTGCAKRSSG*CDHH 341
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 391 HLVTGCAKRSSG*CDHH 341
           H VTGC +R+ G C H+
Sbjct: 133 HPVTGCGERTEGRCLHY 149


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = +1

Query: 394 GKPSDVL---TKAVEKDFGSWDNI 456
           GK  +V+   TKA+     SWDN+
Sbjct: 136 GKTDEVVFRQTKAIANKINSWDNV 159


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
 Frame = +1

Query: 154 ELPYEYNALEP---VISREIMSLHHSKHHATYINNLNVAEEKLAQAQAKGDIDTI 309
           +LP E     P   ++   I  L    HH+T I N +  + K          DTI
Sbjct: 291 DLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTI 345


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +1

Query: 679 DVANWNDISQRYEKSAQVNNFKKI 750
           D ++WND++  +  +  + + K+I
Sbjct: 630 DESHWNDLAMEFYYNRSIPDHKRI 653


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +1

Query: 679 DVANWNDISQRYEKSAQVNNFKKI 750
           D ++WND++  +  +  + + K+I
Sbjct: 668 DESHWNDLAMEFYYNRSIPDHKRI 691


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,092
Number of Sequences: 438
Number of extensions: 5170
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)