Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2g02
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   1.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   8.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 120 KSTRSVTGMLAHTDNGPDKFYAKDLMIMSGNVSVH 16
           K T  +TG  A+   GPD     D  ++ G + +H
Sbjct: 697 KKTMEITGSEANVYYGPDYAVVVDANLIDGRLLLH 731


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 153 HILSVRKTFEAKSTRSVTG 97
           H++SV KT++ K+ RS+ G
Sbjct: 8   HVISVLKTYQDKAPRSLHG 26


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 213 KYTAPLGFVVTRTQAELQVWHILSVRKTFEAKSTRSVTGML 91
           K+TA  G   +  + E  + H+L      E   T S  GML
Sbjct: 27  KFTASPGLSTSDLKREATICHMLKHPHIVELLETYSSEGML 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,917
Number of Sequences: 2352
Number of extensions: 10253
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)