Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2f24
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.53 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.5  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   6.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 402 KFCKYFHSSFKNY*TDFNKTFM-LVFYGQQLIIILILFSTN 521
           +FC+   S+ + Y  DF+ TF+ LV      +I+L+ F  N
Sbjct: 251 EFCRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQFQIN 291


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 444 TDFNKTFMLVFYGQQLIIILILFSTNVL 527
           TD    FML F+   L IIL+     V+
Sbjct: 62  TDKIANFMLTFFNVSLRIILVFSKGKVI 89


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 439 TEQILIRLLCWSSMASNSL 495
           TE++++ L+C+   ASN +
Sbjct: 399 TEEVVLGLVCFRLKASNEI 417


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 512 KQNQNNNELLAIEDQHKSLIKICSVVF 432
           K +    +L   E+   SL+  CSV+F
Sbjct: 80  KDSDLQQKLRYFEEVFSSLLSCCSVIF 106


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 512 KQNQNNNELLAIEDQHKSLIKICSVVF 432
           K +    +L   E+   SL+  CSV+F
Sbjct: 80  KDSDLQQKLRYFEEVFSSLLSCCSVIF 106


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 165 QLADDFDLSVSQASNIFFN 221
           QLA D  L++ Q +N F N
Sbjct: 369 QLAQDTGLTILQVNNWFIN 387


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 632 FFNLNYVLLKINLNIQVQRL 573
           FF +NY L+    ++QV+R+
Sbjct: 379 FFPINYTLVFSVRSVQVERI 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,966
Number of Sequences: 336
Number of extensions: 3496
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)