Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2f22
(602 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 314 1e-84
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 252 5e-66
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 209 4e-53
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 175 5e-43
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 155 8e-37
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 145 8e-34
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 141 1e-32
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 140 2e-32
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 135 9e-31
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 124 2e-27
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 123 4e-27
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 122 5e-27
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 120 3e-26
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 103 3e-21
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 97 2e-19
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 97 3e-19
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 95 9e-19
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 83 4e-15
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 71 3e-11
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 68 2e-10
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 67 3e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 65 1e-09
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 64 3e-09
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 63 4e-09
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 62 1e-08
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 59 7e-08
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 58 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 56 5e-07
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 56 6e-07
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 54 3e-06
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 52 1e-05
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 5e-04
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 39 0.079
UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2; ... 38 0.18
UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1... 37 0.42
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 36 0.74
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 35 1.3
UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=... 35 1.3
UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 1... 35 1.3
UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein MA... 34 2.3
UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Re... 34 2.3
UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas v... 33 5.2
UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotei... 33 6.9
UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia i... 33 6.9
UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila pseudoobscu... 33 6.9
UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A3LNR4 Cluster: Predicted protein; n=5; Saccharomycetal... 33 6.9
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 33 6.9
UniRef50_A5NGI2 Cluster: Virulence plasmid 65kDa B protein; n=3;... 32 9.1
UniRef50_Q554Z4 Cluster: Histidine kinase; n=3; Dictyostelium di... 32 9.1
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 314 bits (771), Expect = 1e-84
Identities = 149/199 (74%), Positives = 172/199 (86%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+
Sbjct: 45 VLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNKLNLLH 104
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF+IWTQSAF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLKS+EIR
Sbjct: 105 LAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLKSEEIR 164
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 540
+VLRAP KRV+RATRKLNPLTN KAMLKLNPYAAVLK+KA+L+ +RKN +AL AEK G
Sbjct: 165 RVLRAPIKRVVRATRKLNPLTNTKAMLKLNPYAAVLKKKAVLDQVKRKNKRALEVAEKRG 224
Query: 541 LKLSKRNPAMKAEKLRERR 597
+KL +PA+KA KL+E+R
Sbjct: 225 IKLPDDDPAVKALKLKEKR 243
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 252 bits (617), Expect = 5e-66
Identities = 120/199 (60%), Positives = 149/199 (74%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E
Sbjct: 183 IQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLK 242
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRFVIWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+EIR
Sbjct: 243 LAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIR 302
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 540
KVLR P KRV R+ R+LNPLTN + ++KLNPYA VLKR+A L +R K LA A+K
Sbjct: 303 KVLRDPRKRVFRSVRRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQN 362
Query: 541 LKLSKRNPAMKAEKLRERR 597
++L+K + A A K R
Sbjct: 363 VELAKSHFANVATKAAANR 381
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 209 bits (510), Expect = 4e-53
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 175 bits (427), Expect = 5e-43
Identities = 92/184 (50%), Positives = 120/184 (65%), Gaps = 3/184 (1%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KV S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE
Sbjct: 183 IEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRLGLLT 242
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF+IWT+SAF +LD +FG+ + S KK + P MA TDLTRL+ SDEI+
Sbjct: 243 LAPGGHVGRFIIWTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINSDEIQ 302
Query: 361 KVLRAPNKRVIR--ATRKLNPLTNNKAMLKLNPYAAVLKR-KAILELRRRKNLKALADAE 531
L AP IR A K NPL N AM KLNPYA V + +A + R K A ++A
Sbjct: 303 SALNAPKLGAIRAHAPLKRNPLKNKSAMDKLNPYAKVAREMQARAQEERSKAKAAKSNAA 362
Query: 532 KSGL 543
+S +
Sbjct: 363 RSAV 366
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 155 bits (376), Expect = 8e-37
Identities = 80/167 (47%), Positives = 107/167 (64%), Gaps = 8/167 (4%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGVEXXXXXXXXXX 177
K S++LRAGKGK+R RR QR+GPL+I+N D+ L +AFRNIPGVE
Sbjct: 161 KAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSVYSMNLL 220
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 357
APGGHLGRF++WT SAFG LD ++GS PS KK+F LP M DL++++ S +I
Sbjct: 221 QLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKIINSSDI 280
Query: 358 RKVLR-----APNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 483
+KVLR A +KR + +K NPL N + L+LNPYAA ++ +
Sbjct: 281 QKVLRPVRGGAVSKRGV--VQKKNPLKNFQVQLRLNPYAATFSKEKL 325
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 145 bits (351), Expect = 8e-34
Identities = 75/165 (45%), Positives = 105/165 (63%), Gaps = 6/165 (3%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRNIPGVEXXXXXXXXXX 177
KV S++LRAGKGK+R RR QR+GPL++++ + L RAFRN+PGVE
Sbjct: 184 KVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRNLPGVETCDVYSLNLL 243
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 357
APGGHLGRF+IW+ SAF LD ++G+ PS KK+F LP ++ D+ RL+ S E+
Sbjct: 244 QLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNVVSQADIGRLINSSEL 303
Query: 358 RKVLRAPNKRVI--RA-TRKLNPLTNNKAMLKLNPYAAVLKRKAI 483
+ V+RA + RA +K NPL N + +L+LNPYAA ++ I
Sbjct: 304 QSVIRAAKGSALTKRAGVQKKNPLLNKQVLLRLNPYAAGYSKEKI 348
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 141 bits (341), Expect = 1e-32
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXXXXX 177
+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 27 VQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLL 86
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 357
APGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL R++ S+++
Sbjct: 87 QLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIINSNQV 146
Query: 358 R-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEK 534
+ KV A V+ +K NPL N+KA+ +LNPYA ++R A A
Sbjct: 147 QEKVQAAKQTTVLHEVQKKNPLKNSKALDRLNPYAK----------KQRAAATAAVKAHT 196
Query: 535 SGLKLSKRNPAMKAE 579
+G K K+N A+K +
Sbjct: 197 TGTKKIKKNKALKKQ 211
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 140 bits (340), Expect = 2e-32
Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 2/193 (1%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXXXXX 177
+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 181 VQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTRLNLL 240
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 357
APGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL R++ S+++
Sbjct: 241 QLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIINSNQV 300
Query: 358 R-KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEK 534
+ KV A +V+ +K NPL N KAM +LNPYA + A+ ++ A
Sbjct: 301 QEKVQPAKTTKVLHDVQKKNPLKNTKAMDRLNPYAKKQRAAAVAAIK----------ANT 350
Query: 535 SGLKLSKRNPAMK 573
G K K+N A+K
Sbjct: 351 KGTKKIKKNKALK 363
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 135 bits (326), Expect = 9e-31
Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 2/188 (1%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEXXXXXXXXXX 177
+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D +AFRNIPGV+
Sbjct: 181 VLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVL 240
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 357
APG H+GRF+IWT+SAF +L+ +FG+ K ++ K F + +MA D+ R++ + E
Sbjct: 241 NLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVVAAEK 300
Query: 358 RKVLRAPNKRVI-RATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEK 534
K+LRA K V+ + ++ NPL N AM+KLNPYA + K + + KA A+
Sbjct: 301 AKLLRA--KIVLPKVPKRANPLKNWAAMVKLNPYAKIASHKLAQVAKAQAAHKAQYAAKM 358
Query: 535 SGLKLSKR 558
+ +K+
Sbjct: 359 EKILAAKK 366
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 124 bits (298), Expect = 2e-27
Identities = 61/164 (37%), Positives = 95/164 (57%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXA 186
++ KS +LRA GKMRNR+ GPLII++ D G+ +AFRNIPGV+ A
Sbjct: 182 RLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLLKLA 241
Query: 187 PGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 366
PGG +GR IW++ AF +LD ++G KKN+ LP+P + N D+ R++ SD+++
Sbjct: 242 PGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQVQAS 301
Query: 367 LRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRR 498
L + T+ N LTN +LNP +L+ A+ ++++
Sbjct: 302 LLDKKSPCKKRTQNKNSLTNFAVRCRLNPAYKLLRALAVRKMKK 345
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 123 bits (296), Expect = 4e-27
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 5/196 (2%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXA 186
++ S +R GKGKMRNRRR+ GPL+++ +D G+ +A RNI GV+ A
Sbjct: 185 RIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLLRLA 244
Query: 187 PGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 366
PGG GR I+T+ A RL ++GS+ S K + LP+P M N D+TR++ S E++ V
Sbjct: 245 PGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEVQSV 304
Query: 367 LRAPN-----KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAE 531
LR + R+ K N LTN LNP L++ A L L A+ +
Sbjct: 305 LRPLRGFRCMGSMGRSKTKKNNLTNLTKRACLNPAYTSLRKSARLAQIPGTRLHAIKQRQ 364
Query: 532 KSGLKLSKRNPAMKAE 579
K+ + K++ K+E
Sbjct: 365 KAANRALKKSIKQKSE 380
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 122 bits (295), Expect = 5e-27
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
Frame = +1
Query: 16 KSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 195
+S+R+R G GK RNRR QR+G LI+ ++++GL AFRNI GV+ APGG
Sbjct: 185 ESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXRLNIRDLAPGG 244
Query: 196 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 375
HLGRF+IWT+ A+ +LD L+G+ + K + P P + NTDL+R++ S ++ VL+A
Sbjct: 245 HLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIHSPTVQSVLKA 304
Query: 376 ---PNKRVIRATRKL---NPLTNNKAMLK 444
+K++I R L + L+ N A +K
Sbjct: 305 RGKQSKKIINVRRNLLIASKLSQNNARIK 333
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 120 bits (289), Expect = 3e-26
Identities = 58/152 (38%), Positives = 94/152 (61%)
Frame = +1
Query: 19 SQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGH 198
S+ +RAG+GKMRNRR I RKGPL+I+N + + R FRN+PGV+ APG H
Sbjct: 174 SRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLLELAPGSH 232
Query: 199 LGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 378
GR ++WT+SAF LD ++ + K+N+ LP+ + TD+ R+L+SD ++K P
Sbjct: 233 PGRLILWTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAVQKTF-VP 284
Query: 379 NKRVIRATRKLNPLTNNKAMLKLNPYAAVLKR 474
+ + RK++P ++ +A+ +L+P V+ +
Sbjct: 285 KRDPLVIERKVDPFSSKEALARLDPSGTVMPK 316
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 103 bits (247), Expect = 3e-21
Identities = 52/118 (44%), Positives = 71/118 (60%)
Frame = +1
Query: 229 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRK 408
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++ R K
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKIHRRVLK 154
Query: 409 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEK 582
NPL N MLKLNPYA ++R I LR+ KN K D + L+ + +K
Sbjct: 155 KNPLKNLGIMLKLNPYAKTMRRNTI--LRQAKNHKLRMDKSAAALEAKSEEKGVPGKK 210
Score = 36.3 bits (80), Expect = 0.56
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRN 57
I KVY SQR+RAGKGKMRN
Sbjct: 43 IKKVYASQRMRAGKGKMRN 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 97.5 bits (232), Expect = 2e-19
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXA 186
+V KS+ +R GKGKMRNRR QRKG LI+ + + FRNI GV+ A
Sbjct: 179 RVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLLELA 237
Query: 187 PGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKV 366
PGG GR +IWT+SAF +LD +FG + ++ F LP + + DL L SD ++ +
Sbjct: 238 PGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAVQAI 297
Query: 367 LRAP 378
L P
Sbjct: 298 LDEP 301
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXX 183
K S + GKGKMRNRR I RKGPLI++ + L +AFRNIPGVE
Sbjct: 45 KAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKL 104
Query: 184 APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 288
APGGHLGRFVIWT+S+F +LD ++ S++ ++++
Sbjct: 105 APGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 95.5 bits (227), Expect = 9e-19
Identities = 60/175 (34%), Positives = 93/175 (53%)
Frame = +1
Query: 31 RAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRF 210
R+ KGK R +KGPL+I+N+D+G+ +AFRNIPGVE AP +GR
Sbjct: 187 RSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRL 246
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
+WT+SAF LD ++ S KK F+LP+ M N D+ ++ SD ++ VL K V
Sbjct: 247 TVWTESAFKALDGIYES-------KKRFSLPRSIMTNADIEAVITSDAVQSVLN-EKKEV 298
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSK 555
+ PL + KL+ A +KA+ E+ L+A +A+++ ++ K
Sbjct: 299 V-------PLPKCRCCKKLSVGACEDWQKALKEV---AELRAAQEAKRTSPEVVK 343
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +1
Query: 229 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV-IRATR 405
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+ R +
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRIHRRVLK 232
Query: 406 KLNPLTNNKAMLKLNP 453
K NPL N + MLKLNP
Sbjct: 233 KKNPLKNLRLMLKLNP 248
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +1
Query: 22 QRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHL 201
+R RAG+GKMR RR +++K L++ KD G+ +A +N+PGV+ APG H
Sbjct: 174 KRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLNVELLAPGCHP 233
Query: 202 GRFVIWTQSA 231
GR +WT+SA
Sbjct: 234 GRLTVWTKSA 243
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 67.7 bits (158), Expect = 2e-10
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +1
Query: 22 QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 195
+R+ G+ R+ R+ + GPLII +G RAFRNIPGVE AP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238
Query: 196 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 375
LGR +W++SAF LD +P + N DL+ L++S ++ LRA
Sbjct: 239 ALGRLCVWSKSAFEALDDYIKM------------MPTKLLKNADLSALIESTPVQAALRA 286
Query: 376 PNKRVIRATRK 408
P + +ATRK
Sbjct: 287 PREGTPKATRK 297
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/85 (36%), Positives = 49/85 (57%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I++ K +++++GKGK+R R+ KGPL++ D+G++ RN GV+
Sbjct: 170 IVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAEL 229
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLF 255
APG H GR I+T+SA +L LF
Sbjct: 230 LAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +1
Query: 28 LRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGR 207
+RAGKG MR R+ K L++ ++ GL +A RNIPGV+ APGG GR
Sbjct: 232 IRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSAEDLAPGGDAGR 291
Query: 208 FVIWTQSAFGRLD 246
+WT++A G L+
Sbjct: 292 LTVWTKAAIGALE 304
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 310 KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAIL- 486
KM N+DL+R+LK EI++ L+AP K + K NPLTN + MLKLNP A + R IL
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEIQHRVSKKNPLTNLRIMLKLNPDAKTMHRNTILP 62
Query: 487 ELRRRK-NLKALADAEKSGLKL 549
E R K +K+ ++G +L
Sbjct: 63 EARNHKLQVKSRKQQPRTGSQL 84
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +1
Query: 22 QRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHL 201
++L++GKGKMRNRR + GPL++F + ++ RNI ++ APGGHL
Sbjct: 181 RKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNLTKLAPGGHL 237
Query: 202 GRFVIWTQSAFGRLDPL 252
GR IW+ AF L+ +
Sbjct: 238 GRLCIWSSKAFQMLNTI 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +1
Query: 19 SQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGH 198
++R+RAGKGK R RR ++ K LI+ ++D+G+ RN PGV+ APG H
Sbjct: 180 NRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLGVEHLAPGAH 239
Query: 199 LGRFVIWTQSAFGRLDPLFG 258
GR ++T A L+ G
Sbjct: 240 PGRLTVFTPGALEVLEERLG 259
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXA 186
+V S+ +RAG+GKMRNRR + R+GP+++ ++G TRAFRNI G++ A
Sbjct: 181 RVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSALTLLHLA 239
Query: 187 PGG 195
PGG
Sbjct: 240 PGG 242
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXXXX 183
+V + R+RAGKGKMR R+ + GPLII + + +A RN+ GV+
Sbjct: 178 RVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDVSVIHL 237
Query: 184 APGGHLGRFVIWTQSAFGRLD 246
APG H GR I+T+S+ LD
Sbjct: 238 APGAHPGRLTIYTESSIKILD 258
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 7 KVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXXXXX 183
+VY+ +R RAGKGK R R I+RKGPLI+ N ++ L +A NIPG++
Sbjct: 183 RVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVELL 241
Query: 184 APGGHLGRFVIWTQSAFGRL 243
APG GR +I ++ A L
Sbjct: 242 APGAKPGRLLIISKDALETL 261
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 56.0 bits (129), Expect = 6e-07
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 RLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHL 201
++RAGKGKMR RR + K L++ + + L A RN PGV+ APGG
Sbjct: 205 KIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNLNILVLAPGGVP 264
Query: 202 GRFVIWTQSAFGRLDPLF 255
GR +WT A +L LF
Sbjct: 265 GRLTLWTAPAVEKLRGLF 282
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +1
Query: 16 KSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 195
+ + +RAG+GKMR RR Q K LI+ + +AFR++PGV+ APGG
Sbjct: 176 EGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPNSLSIRKLAPGG 234
Query: 196 HLGRFVIWTQSAFGRL 243
GR I+T+ A L
Sbjct: 235 VGGRLTIFTEGAIESL 250
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 51.6 bits (118), Expect = 1e-05
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIPGVEXXXXXXXXXX 177
+L+ + +R AGKGKMR RR K L + + L A + +PGV+
Sbjct: 182 VLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVL 241
Query: 178 XXAPGGHLGRFVIWTQSAFGRLDPLF 255
APGGH GR I+T A L F
Sbjct: 242 HLAPGGHPGRLTIYTTEALKLLSRRF 267
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 46.4 bits (105), Expect = 5e-04
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 52 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 219
R +R+ +++ GPL++ +G RAFRNIPGV+ AP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 220 TQSAFGRLD 246
++SAF LD
Sbjct: 246 SKSAFELLD 254
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 39.1 bits (87), Expect = 0.079
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 25 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 204
+++AG+G R R+ +R ++ D+ T A RN+ G + APGG G
Sbjct: 173 KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPG 230
Query: 205 RFVIWTQSAFGRL 243
R ++T+SA +
Sbjct: 231 RLTVFTESALAEV 243
>UniRef50_Q5AGI4 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 197
Score = 37.9 bits (84), Expect = 0.18
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 367 LRAPNKRV-IRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGL 543
+R +KR+ IR ++K+ + + + M + N +KRK I+ +++R+N+K + +K
Sbjct: 1 MRERSKRIMIRRSKKIMNMKSKRNMKERNKKIMNVKRK-IMNMKKRRNMKKRRNMKKRKN 59
Query: 544 KLSKRNPAMKAEKLRERRR 600
+RN K +K ER++
Sbjct: 60 MKKRRNMKRKRKKTMERKK 78
>UniRef50_A6GVL2 Cluster: Putative cell surface protein SprD; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative cell
surface protein SprD - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1286
Score = 36.7 bits (81), Expect = 0.42
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 382 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 561
K +++AT+K NP T N + K P +R L L+ K+ KA A+AEK +
Sbjct: 310 KPIVKATKKTNPGTKNATVNKKTPADLQKERAEALALKTEKD-KARAEAEKVRKAKELAD 368
Query: 562 PAMKAEKLRERRR 600
KAE L R+
Sbjct: 369 AKEKAEVLAALRK 381
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 35.9 bits (79), Expect = 0.74
Identities = 26/89 (29%), Positives = 46/89 (51%)
Frame = +1
Query: 331 TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 510
TRL+ E R+ + A N++ ++A + +N+A L+ A+ KR +E R+RK
Sbjct: 975 TRLISQAE-REEIEA-NRQRVQAAAQARKENSNRARLEGRKAASAKKRT--VEYRKRKEK 1030
Query: 511 KALADAEKSGLKLSKRNPAMKAEKLRERR 597
+ + +A K G L + +KL E+R
Sbjct: 1031 ELIEEAHKEGRILGNSELEARLDKLMEKR 1059
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 212 SSGLSPHSAGLTPYSGHGRHHRNKRRTSTCPSQR 313
SSG H +GL+ S +G+H R++S+C QR
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_Q9C5C0 Cluster: Mitogen-activated protein kinase 18; n=73;
Viridiplantae|Rep: Mitogen-activated protein kinase 18 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 603
Score = 35.1 bits (77), Expect = 1.3
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +1
Query: 322 TDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYA-AVLKRKAILELRR 498
TDL KS+ I V ++ + RK NP+T ++ K +P A +L+R + +
Sbjct: 232 TDLLGTPKSETISGVRNDKARKYLTEMRKKNPVTFSQKFSKADPLALRLLQRLLAFDPKD 291
Query: 499 RKN-LKALADAEKSGLKLSKRNPA----MKAEKLRERRR 600
R +ALAD GL +R P+ K E ERRR
Sbjct: 292 RPTPAEALADPYFKGLSKIEREPSSQQISKMEFEFERRR 330
>UniRef50_O60293 Cluster: Coiled-coil domain-containing protein 131;
n=26; Amniota|Rep: Coiled-coil domain-containing protein
131 - Homo sapiens (Human)
Length = 1989
Score = 35.1 bits (77), Expect = 1.3
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 244 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 417
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 762 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 821
Query: 418 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 594
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 822 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 874
>UniRef50_Q54WV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 987
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 466 LKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERR 597
+K K+ ++ ++K KALA E+ +KL KAEKL ERR
Sbjct: 410 IKSKSFRKVEKKKKEKALAKREEELMKLDPEFAKHKAEKLEERR 453
>UniRef50_Q6NE17 Cluster: Putative erythrocyte-binding protein
MAEBL; n=1; Leptospira phage LE1|Rep: Putative
erythrocyte-binding protein MAEBL - Leptospira phage LE1
Length = 859
Score = 34.3 bits (75), Expect = 2.3
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +1
Query: 283 KKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAA 462
KKN +LP+ + +L++++ + + +K I + RK L+ ++ ++ A
Sbjct: 304 KKNSSLPKSQTETKELSKVVNEQDPIETKITQSKNKIDSIRKDKSLSEDEFRTEIEKARA 363
Query: 463 VLKRKAILELRRRKNLKALADAEK 534
L R A+ E + R K+L+D EK
Sbjct: 364 EL-RSAMKEKQARDGFKSLSDLEK 386
>UniRef50_Q23TC4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 966
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 304 QPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAI 483
Q K AN + RLL S+ + ++P+ ++ KLNP++ N + L LN + L +K++
Sbjct: 330 QHKRANIQV-RLLSSEISKNQSQSPSNNILNQQNKLNPISTNTSQL-LNKQISQLNQKSL 387
Query: 484 LE 489
+
Sbjct: 388 TQ 389
>UniRef50_Q7KKH3 Cluster: Protein SDA1 homolog; n=4; Coelomata|Rep:
Protein SDA1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 712
Score = 34.3 bits (75), Expect = 2.3
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +1
Query: 277 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 447
K+KK+ + K A +L TR+ ++ +++ A K+ + + RK PL ++A +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624
Query: 448 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRR 600
N + K++ + R + ++A D E+ G K + N ++ RE+R+
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHC-SKTNREKRK 675
>UniRef50_Q23DJ6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1067
Score = 33.1 bits (72), Expect = 5.2
Identities = 22/96 (22%), Positives = 42/96 (43%)
Frame = +1
Query: 223 QSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRAT 402
+S F L + + NLP + + L+ + ++L ++R T
Sbjct: 552 ESQFDNNLSLIDDIENEQSMSNSSNLPLVSNQASAINIKLQEKDFYELLNLESERAAITT 611
Query: 403 RKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNL 510
+K+N + NNK +LK V + ++ L++ KNL
Sbjct: 612 KKINRIHNNKMVLKSAFEVNVQQSDEVILLKQEKNL 647
>UniRef50_A2G612 Cluster: SNF7 family protein; n=2; Trichomonas
vaginalis G3|Rep: SNF7 family protein - Trichomonas
vaginalis G3
Length = 199
Score = 33.1 bits (72), Expect = 5.2
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 346 SDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALAD 525
SD++ + + +K + RKL+ LT M L+RKA L+RRK L+
Sbjct: 23 SDQLGRKSESIDKEIAEINRKLSELTKQMKMPSNKSRVPTLRRKATELLKRRKMLEGF-Q 81
Query: 526 AEKSGLKLSKRNPAMKAEKLR 588
+ G + + N A + ++++
Sbjct: 82 GKIDGQRFNIDNMAFQQQQMK 102
>UniRef50_Q9PQ05 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 705
Score = 32.7 bits (71), Expect = 6.9
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 382 KRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRN 561
K+ T + A+L + Y+ VLK KA +L+ NLK + D + + L +++
Sbjct: 47 KKFKTTTNSIELFLEGSAVLASHSYSVVLKEKATGDLKTINNLKLVKDNDLNKLIINELK 106
Query: 562 PAMKAE 579
P M E
Sbjct: 107 PNMGYE 112
>UniRef50_Q1MQI5 Cluster: Outer membrane protein; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Outer membrane protein -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 601
Score = 32.7 bits (71), Expect = 6.9
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 409 LNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSG 540
LNP+ KA L + PY K+K IL LR R + D K+G
Sbjct: 419 LNPIQGTKATLNVTPYIGKYKKK-ILTLRSRFDFSFYIDVLKTG 461
>UniRef50_Q28ZB7 Cluster: GA20803-PA; n=1; Drosophila
pseudoobscura|Rep: GA20803-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 655
Score = 32.7 bits (71), Expect = 6.9
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 256 GSWKTPSKQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNN 429
G W T + + + K A +L TR+ ++ +++ A K+ + +RK PL +
Sbjct: 502 GQWVTVNHSDGDLKILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTNSRK-RPLEQD 560
Query: 430 KA-MLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRN 561
+A +KLN + K++ + R + ++A D E+ G K + N
Sbjct: 561 RAEFVKLNSIEMIFKKRKHDKESRMETVQAGRQDRERFGWKDGRVN 606
>UniRef50_Q23MI1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2209
Score = 32.7 bits (71), Expect = 6.9
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +1
Query: 277 KQKKNFNLPQPKMANTDLTRLLKSDEIR--KVLRAPNKRVIRATR----KLNPLTNNKAM 438
K K +NLP + L RLLK + ++ K L + R ++ +R +PL +N+
Sbjct: 19 KNDKIWNLPPQIIKKKSLLRLLKKNVMKLFKQLTSSTCRYLKFSRYCIANSSPLYSNQIK 78
Query: 439 LKLNPYAAVLKRKAILELRRRK 504
K + AV+ +K + ELR K
Sbjct: 79 FKFSSTDAVVSQKQLEELRNYK 100
>UniRef50_A3LNR4 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 233
Score = 32.7 bits (71), Expect = 6.9
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 325 DLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRK 504
D+ RLLK D++ +R N+R ++A + L N + LK A K + ++K
Sbjct: 36 DIERLLKKDKLPADVRTENERAVKALKV--ELQNTQFNLKAKQVAK--KYHMVRFFEKKK 91
Query: 505 NLKALADAEKSGLKLSKRNPAMKAEKLRER 594
++ L A K+ +SK + +K R++
Sbjct: 92 AVRKLKQANKNLEDISKTDVRKDIKKARKQ 121
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 32.7 bits (71), Expect = 6.9
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +1
Query: 16 KSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 195
+ ++ R GK +R R + K L + D + RA PGV APG
Sbjct: 179 EGRKPRTGKSALRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPARDLSVLDLAPGA 238
Query: 196 HLGRFVIWTQSAFGRL 243
R +++++A L
Sbjct: 239 EPARLTVYSKAAIESL 254
>UniRef50_A5NGI2 Cluster: Virulence plasmid 65kDa B protein; n=3;
Shewanella baltica|Rep: Virulence plasmid 65kDa B
protein - Shewanella baltica OS223
Length = 1540
Score = 32.3 bits (70), Expect = 9.1
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 116 LAPSATSPVWSS*MLTS*TS*-SWLREVILDVSSSGLSPHS 235
L P+A +WSS + S TS WL ++I D + GL PHS
Sbjct: 260 LHPAANLYLWSSDNVNSATSGVEWLFKLIFDYGARGLDPHS 300
>UniRef50_Q554Z4 Cluster: Histidine kinase; n=3; Dictyostelium
discoideum|Rep: Histidine kinase - Dictyostelium
discoideum AX4
Length = 1671
Score = 32.3 bits (70), Expect = 9.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 357 QEGPPCSQQTRDPCYTQIEPAHQ*QGDAETQSLRGRAEEESYLRAAQKEELEGSG 521
QE PP SQQ P Q + Q Q + Q + + + E ++EE EG G
Sbjct: 148 QEEPPSSQQEEPPLSQQQQEQEQEQEQEQEQEEQSKQKIEGKGGGGEEEECEGGG 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,979,892
Number of Sequences: 1657284
Number of extensions: 11401744
Number of successful extensions: 32424
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 31009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32369
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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