Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2f22
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    28   0.27 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   3.3  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   7.6  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   7.6  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
 Frame = +1

Query: 256 GSWKTPSKQKKNFNLPQP------KMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 414
           G  K P K+KK  +LP+P      K  N DL ++LK       L+    +V +  R  N
Sbjct: 153 GQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLKGLTHDDALKDVGDQVAKVRRTQN 211


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 257 PNKGSSLPNAD*VQMTKRPR*PPGA 183
           P  G   P    V M  RP+ PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
 Frame = +1

Query: 232 FGRLDPLFGSWKTPSKQKKNFNLPQPKM------ANT--DLTRLLKSDEI--RKVLRAPN 381
           FGR DPL+ S+   +  ++NF    P        +N   +L    + D++  +K +RAP 
Sbjct: 101 FGRNDPLWTSFNENALLEENFEKRAPSQRLRWGRSNLFGNLVNQFQQDDVMQQKTIRAPQ 160

Query: 382 KRV 390
            R+
Sbjct: 161 LRL 163


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 266 RHHRNKRRTSTCPSQRWPTLTSHVFSSL--MRSGRSSVLPTNA 388
           +  + ++R    P+Q+WPT+   V +    +    SS +P  A
Sbjct: 196 QQQQKQQRQQRLPAQQWPTVQQSVRAQRQGVTESASSAVPDEA 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,496
Number of Sequences: 2352
Number of extensions: 11213
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)