Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2f22
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 209 7e-54
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 209 7e-54
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 207 2e-53
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 204 1e-52
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 202 6e-52
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 35 0.19
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 35 0.19
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 30 5.4
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 30 5.4
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 30 5.4
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 30 5.4
CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein. 30 5.4
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 30 5.4
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 30 5.4
AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open read... 30 5.4
AK130944-1|BAC85470.1| 609|Homo sapiens protein ( Homo sapiens ... 30 5.4
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 5.4
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 209 bits (510), Expect = 7e-54
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 359
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 360 ALQAKSDEKAAVAGK 374
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 207 bits (506), Expect = 2e-53
Identities = 102/195 (52%), Positives = 129/195 (66%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 194 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 253
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 254 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 313
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 314 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQARNHKLRVDKAAAAAA 373
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 374 ALQAKSDEKAAVAGK 388
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 204 bits (499), Expect = 1e-52
Identities = 94/171 (54%), Positives = 120/171 (70%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 239
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP +M NTDL+R+LKS EI+
Sbjct: 240 LAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEMINTDLSRILKSPEIQ 299
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLK 513
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+
Sbjct: 300 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLR 350
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 202 bits (494), Expect = 6e-52
Identities = 101/195 (51%), Positives = 128/195 (65%), Gaps = 1/195 (0%)
Frame = +1
Query: 1 ILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXX 180
I KVY SQR+RAGKGKMRNRR IQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 180 IKKVYASQRMRAGKGKMRNRR-IQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILK 238
Query: 181 XAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIR 360
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LKS EI+
Sbjct: 239 LAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILKSPEIQ 298
Query: 361 KVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKA-LADAEKS 537
+ LRAP K++ R K NPL N + MLKLNPYA ++R IL R L+ A A +
Sbjct: 299 RALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVDKAAAAAA 358
Query: 538 GLKLSKRNPAMKAEK 582
L+ A A K
Sbjct: 359 ALQAKSDEKAAVAGK 373
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 35.1 bits (77), Expect = 0.19
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 244 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 417
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 85
Query: 418 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 594
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 86 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 138
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 35.1 bits (77), Expect = 0.19
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 244 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP-NKRV-IRATRKLNP 417
DPL P ++K + L + ++AN + RL+KSD+++ +P N V I ++
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSPANSDVEIDGIGRIAM 830
Query: 418 LTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 594
+T ++ + LK+ IL ++ LK L E + K S RN K KL E+
Sbjct: 831 VTK-----QVTDAESKLKKHRILLMKDESVLKNLVQQE-AKKKESVRNAEAKITKLTEQ 883
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>CT841517-1|CAJ86447.1| 2151|Homo sapiens dJ694E4.2 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 567
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 1570 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 1629
Query: 568 MKAEKLRERR 597
MK +KLR RR
Sbjct: 1630 MKTQKLRYRR 1639
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 45 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 95
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 96 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 155
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 156 PTKRPPVLRA 165
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 30.3 bits (65), Expect = 5.4
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +1
Query: 211 VIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 390
V+ Q A ++PLF K+ KNF + Q DLTR +K + +R +R
Sbjct: 18 VVKKQEAKKVVNPLF------EKRPKNFGIGQDIQPKRDLTRFVKWP---RYIRLQRQRA 68
Query: 391 IRATRKLNPLTNNKAMLKLNPYAAV----LKRKAILELRRRKNLKALADAEK----SGLK 546
I R P N+ L+ A L K E ++ K + LA AEK G
Sbjct: 69 ILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDV 128
Query: 547 LSKRNPAMKA 576
+KR P ++A
Sbjct: 129 PTKRPPVLRA 138
>AL031255-4|CAI22448.1| 2151|Homo sapiens chromosome 22 open reading
frame 30 protein.
Length = 2151
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 567
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 1570 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 1629
Query: 568 MKAEKLRERR 597
MK +KLR RR
Sbjct: 1630 MKTQKLRYRR 1639
>AK130944-1|BAC85470.1| 609|Homo sapiens protein ( Homo sapiens
cDNA FLJ27434 fis, clone WMD09549. ).
Length = 609
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 IRATRKLNPLTN-NKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPA 567
+ A +L P T K+++ P + L RK K A K + SK PA
Sbjct: 173 LSAPTRLEPETAPTKSLVSHIPKQMSTPCHPLRSLNFRKTTKESALLNKLSILASKLAPA 232
Query: 568 MKAEKLRERR 597
MK +KLR RR
Sbjct: 233 MKTQKLRYRR 242
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 221 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 361
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,291,996
Number of Sequences: 237096
Number of extensions: 1826742
Number of successful extensions: 4120
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4114
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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