Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2f21
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54K11 Cluster: G-protein-coupled receptor (GPCR) famil...    35   1.4  
UniRef50_Q4SI60 Cluster: Chromosome 5 SCAF14581, whole genome sh...    35   1.9  
UniRef50_Q2RAK3 Cluster: Expressed protein; n=4; Oryza sativa|Re...    33   7.5  
UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   7.5  
UniRef50_UPI0000DA232E Cluster: PREDICTED: hypothetical protein;...    32   10.0 

>UniRef50_Q54K11 Cluster: G-protein-coupled receptor (GPCR) family
            protein; n=1; Dictyostelium discoideum AX4|Rep:
            G-protein-coupled receptor (GPCR) family protein -
            Dictyostelium discoideum AX4
          Length = 1604

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 20/81 (24%), Positives = 40/81 (49%)
 Frame = +2

Query: 155  IYFFLLTTSLLVDNIRIGIKPRAFEK*RDVDVENTGAIILIDAVMTAPILDLGVCCINHR 334
            ++FF++T+++ +   R+    R  E+  D+ +EN+  + L   ++  P + + V  I  R
Sbjct: 1221 LFFFIITSAIFIKQYRVYCLIRGVEELHDMSIENSYLLKLQSFILIIPAILIAVSVIATR 1280

Query: 335  RDRVVGKKIKTPTPQDVYWYS 397
              R     ++  T Q  Y YS
Sbjct: 1281 MHRKYNFDLQKETIQ-AYCYS 1300


>UniRef50_Q4SI60 Cluster: Chromosome 5 SCAF14581, whole genome shotgun
            sequence; n=3; Clupeocephala|Rep: Chromosome 5 SCAF14581,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 991

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -2

Query: 610  PADLHDAVPGYSGAHASPPSTEIVAAGGKNNCAWRSVQECDSVLRLDGTGKVVINLT 440
            P  L  A P YSG H SPP     + G  +       Q  DS+ +LDG+    + L+
Sbjct: 861  PMHLSPATPHYSGHH-SPPLLNQTSNGNPSQAVLEFAQYLDSLFKLDGSSSPPLELS 916


>UniRef50_Q2RAK3 Cluster: Expressed protein; n=4; Oryza sativa|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 629

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 610 PADLHDAVPGYSGAHASPPSTEIVAAGGKNNCAWRSVQE 494
           PADL D + G  G+H  P ST+    G +   A  + +E
Sbjct: 121 PADLKDLIAGLYGSHPQPSSTDAAEVGTQEGSAVAAAEE 159


>UniRef50_Q0URD4 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 246

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 432 REIVRLMTTLPVPSNRNTLSHSCTERHAQLFLP 530
           R  V L   LPVP + NT +H C  RH   + P
Sbjct: 81  RRRVHLPLALPVPQSSNTTAHPCCARHTPNWFP 113


>UniRef50_UPI0000DA232E Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 270

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 462 PVPSNRNTLSHSCTERHAQLFLPPAATISVEGGDACAPEYPGTASCKSAGVCSSAGQ 632
           P PS  +T++  C   H Q+ +   A   +  G  CAP +P   S   A VC   GQ
Sbjct: 210 PWPSVCSTMA-KCVLHHGQVSVSTMAKCVLHHGQVCAPPWPSVCS-TMASVCVHHGQ 264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,371,888
Number of Sequences: 1657284
Number of extensions: 11392822
Number of successful extensions: 28861
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28857
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)