Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2f20
         (257 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   2.4  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   3.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   5.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   5.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   9.8  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 126 SSQSAMMGDYRNSR*CRGHKCL*STIIXYDRSQSALGR 13
           SS SA  G+      C+   CL   +  Y R+ S +GR
Sbjct: 95  SSDSASSGNVY----CKCDDCLLGIVDDYQRNPSVVGR 128


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 251 GDEVRYAYRFS 219
           GD   YAYRF+
Sbjct: 121 GDNCEYAYRFN 131


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 256 CVVMKLDMPIDLARPRFLASSM 191
           C+   LD PI+L+  R  A ++
Sbjct: 397 CIARILDEPIELSGYRLTAGTV 418


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 132 HKKPGFKGFDIVDYLDXWKGMEEAKNL 212
           H+K  F G D VD++D  + +    NL
Sbjct: 300 HQKRYFFGRDSVDHVDFDEFLPPPPNL 326


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 42  YDRSQSALGRXIK 4
           YDR  S LGR ++
Sbjct: 82  YDRVLSVLGRHVR 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,298
Number of Sequences: 438
Number of extensions: 1338
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)