Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2f07
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   1.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.9  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   5.9  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 260 LFVRFDFLFHLNLFIAAFLIEYFSF 186
           LF+ F F+F L+  + +F   +FSF
Sbjct: 51  LFINFIFMFLLHFVLFSFSFPFFSF 75


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 623 LFTYNRSQEEPKFTNVYKLRCHN*GY 700
           +FTY    ++    N+YK+ C N G+
Sbjct: 405 IFTYLIGTDKSGGKNLYKMACENKGF 430


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 501 KVTFVGENFTRKPPKFERFI 560
           ++TF+   FTR+  KFE+ +
Sbjct: 280 RMTFLSSKFTRRVDKFEKCV 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,251
Number of Sequences: 2352
Number of extensions: 12823
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)