Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2f03
(607 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 143 5e-36
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 26 1.1
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 24 4.4
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 24 4.4
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 23 7.7
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 7.7
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 23 7.7
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 23 7.7
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 7.7
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 143 bits (346), Expect = 5e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 223
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 224 IQKESTLHLV 253
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 143 bits (346), Expect = 5e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 223
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 224 IQKESTLHLV 253
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 143 bits (346), Expect = 5e-36
Identities = 69/70 (98%), Positives = 70/70 (100%)
Frame = +2
Query: 44 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 223
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 224 IQKESTLHLV 253
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 25.8 bits (54), Expect = 1.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 34 ESEDANFRKDPHGQDHH 84
ESE N RK PH QD H
Sbjct: 50 ESEGGNLRKYPHFQDIH 66
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 526 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 440
L GTY ++F +V L VV HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.8 bits (49), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 526 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 440
L GTY ++F +V L VV HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 572 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 480
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 572 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 480
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLTVSRAVLVRSC 140
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 572 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 480
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 7.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 572 YLKSIIHSSRERSLQARGDLFICRRL*RPSC 480
Y+ +IH SRE L+ L + R + SC
Sbjct: 110 YMPQVIHVSREDQLKDSSGLAVSRAVLVRSC 140
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 7.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -3
Query: 269 HHEASTPGGGWIPSGYCSPRGYVHLPAAFQRRSTSV 162
HH A P G P P+ H P A R S +
Sbjct: 824 HHAAQQPPPGSHPGAQTQPQLSQHPPGASGRSSAVI 859
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,381
Number of Sequences: 2352
Number of extensions: 12918
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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