Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e22
         (201 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P18569 Cluster: Ecdysteroid UDP-glucosyltransferase pre...   102   2e-21
UniRef50_Q83140 Cluster: Ecdysteroid UDP-glucosyltransferase pre...    31   4.9  
UniRef50_Q47076 Cluster: BfpT, bfpV, bfpW and transposase genes,...    30   8.6  
UniRef50_Q58272 Cluster: Isopentenyl-diphosphate delta-isomerase...    30   8.6  

>UniRef50_P18569 Cluster: Ecdysteroid UDP-glucosyltransferase
           precursor; n=14; Nucleopolyhedrovirus|Rep: Ecdysteroid
           UDP-glucosyltransferase precursor - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 506

 Score =  102 bits (244), Expect = 2e-21
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = +2

Query: 5   AXKFTERVIRYRHDISRRLYSLKTTAANVPYSNYYMYKSVLSIVMNHIAHF 157
           A KFTERVIRYRHDISR+LYSLKTTAANVPYSNYYMYKSV SIVMNH+ HF
Sbjct: 456 AIKFTERVIRYRHDISRQLYSLKTTAANVPYSNYYMYKSVFSIVMNHLTHF 506


>UniRef50_Q83140 Cluster: Ecdysteroid UDP-glucosyltransferase
           precursor; n=5; Nucleopolyhedrovirus|Rep: Ecdysteroid
           UDP-glucosyltransferase precursor - Mamestra brassicae
           nuclear polyhedrosis virus (MbNPV)
          Length = 528

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +2

Query: 14  FTERVIRYRHDISRRLYSLKTTAANVPYSNYYM----YKSVLSIVMNHI 148
           +TE VI  R  +   +  LKT AANV YS+Y M       ++  VMNH+
Sbjct: 473 YTEHVIESRRRVVPTM--LKTRAANVNYSDYIMSYVFVPFIMFTVMNHL 519


>UniRef50_Q47076 Cluster: BfpT, bfpV, bfpW and transposase genes,
           complete cds; n=21; Enterobacteriaceae|Rep: BfpT, bfpV,
           bfpW and transposase genes, complete cds - Escherichia
           coli
          Length = 186

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 50  SRRLYSLKTTAANV-PYSNYYMYKSVLSIVMNHIA 151
           SRR+ S  T A NV  +S + + ++VLS V+NH+A
Sbjct: 142 SRRVISYLTLAKNVLRHSPFILRRTVLSTVLNHLA 176


>UniRef50_Q58272 Cluster: Isopentenyl-diphosphate delta-isomerase;
           n=6; Methanococcales|Rep: Isopentenyl-diphosphate
           delta-isomerase - Methanococcus jannaschii
          Length = 359

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 73  NNSCQCTVLKLLHV*ICTFYCNESY-STLLVTSINVIH 183
           NN  +  V KL H+ +C+ YCN  Y  T L+  I +IH
Sbjct: 3   NNRNEIEVRKLEHIFLCS-YCNVEYEKTTLLEDIELIH 39


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,634,316
Number of Sequences: 1657284
Number of extensions: 2374006
Number of successful extensions: 4891
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4891
length of database: 575,637,011
effective HSP length: 46
effective length of database: 499,401,947
effective search space used: 9988038940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)