Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e22
         (201 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   2.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    20   2.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    20   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   2.9  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    19   3.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    19   3.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    19   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   5.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    18   8.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    18   8.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    18   8.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    18   8.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    18   8.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    18   8.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 73  NNSCQCTVLKLLHV*ICTFYCNESYSTL 156
           +N    TV  +L    C F+   SY+TL
Sbjct: 69  HNCLDFTVQNILTFLSCRFHQGASYNTL 96


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 52  TDVMSISNYAFC 17
           TD   + NYAFC
Sbjct: 272 TDTAHMINYAFC 283


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 52  TDVMSISNYAFC 17
           TD   + NYAFC
Sbjct: 272 TDTAHMINYAFC 283


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 2.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 88  CTVLKLLHV*ICTFYCNESYSTLLVTSINVIHHYL 192
           CTVL++       +     Y  +  T  NV+H YL
Sbjct: 508 CTVLRVQR--FNNYQSLAHYLRVFFTVFNVVHCYL 540


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 19.4 bits (38), Expect = 3.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 127 KYRFIHVVI*VRYIGS 80
           K+R+ HV++  R IGS
Sbjct: 144 KWRYNHVLMVQRMIGS 159


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 3.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 127 KYRFIHVVI*VRYIGS 80
           K+R+ HV++  R IGS
Sbjct: 304 KWRYNHVLMVQRMIGS 319


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 3.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 127 KYRFIHVVI*VRYIGS 80
           K+R+ HV++  R IGS
Sbjct: 304 KWRYNHVLMVQRMIGS 319


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.0 bits (37), Expect = 5.0
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 44  DISRRLYSLKTTAANVPYSNYYMYKSVLSIVMNHIAHF*LRQ 169
           D   R+Y++ T     P       KSV  +  +  +H  +R+
Sbjct: 297 DAITRIYAIATMWHETPEEMMEFLKSVFRLDQDQCSHRIVRE 338


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.0 bits (37), Expect = 5.0
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 95  YSNYYMYKSVLSIVMNHIAHF 157
           Y N      +L  V+NH  HF
Sbjct: 467 YQNEAEEVKILLDVINHFPHF 487


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 97  LKLLHV*ICTF 129
           ++LLH+ +C F
Sbjct: 1   MELLHITLCAF 11


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +2

Query: 59  LYSLKTTAANVPYSNYYMYKS 121
           +Y   +     P  NYY Y S
Sbjct: 7   MYGHHSQHGTYPSDNYYNYTS 27


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 150 HTFSYVNKCYSS 185
           H FS +N  YSS
Sbjct: 159 HCFSMLNYVYSS 170


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 12/42 (28%), Positives = 16/42 (38%)
 Frame = +1

Query: 46  HQSSIVFIKNNSCQCTVLKLLHV*ICTFYCNESYSTLLVTSI 171
           H+ S   +      CT +  L     TF+      T L TSI
Sbjct: 30  HRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTDLATSI 71


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +2

Query: 59  LYSLKTTAANVPYSNYYMYKS 121
           +Y   +     P  NYY Y S
Sbjct: 7   MYGHHSQHGTYPSDNYYNYTS 27


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 18.2 bits (35), Expect = 8.8
 Identities = 7/21 (33%), Positives = 9/21 (42%)
 Frame = +2

Query: 59  LYSLKTTAANVPYSNYYMYKS 121
           +Y   +     P  NYY Y S
Sbjct: 7   MYGHHSQHGTYPSDNYYNYTS 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,530
Number of Sequences: 336
Number of extensions: 780
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2371622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)