Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e20
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   3.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.5  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.6  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    23   8.0  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +3

Query: 489 HSCTERHAQLFLPPAATVSVEGCDACAPEYPGTASCQSAGVCSQ 620
           H C  R   LFLP   +   + C  CA E  G  S Q   VC Q
Sbjct: 232 HRCFGRGEGLFLPELYSYDEQSCIECA-ECRGLFSPQKF-VCHQ 273


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 555 CDACAPEYPGTASCQSAGVCSQC 623
           CD C P + G    +  G C +C
Sbjct: 863 CDQCLPGHFGDPLAEPHGSCEEC 885


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/52 (26%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
 Frame = +3

Query: 471 NRNTPSHSCTERHAQLFLPPAATVSVEG-CDACAPEYPGTASCQSAGVCSQC 623
           N   P H C        +     V   G C  C  +      C+S  VC QC
Sbjct: 348 NEQHPLHVCERFERASVINREEIVRKHGLCFNCLRKGHSARECRSTYVCQQC 399


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 474 D*MVPVKWSLISRSHEYNYVPKNGSTELCQE 382
           D  +P   S+ + +H+Y + PK  S  L  E
Sbjct: 297 DFSIPGVTSISADTHKYGFTPKGSSVILYSE 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,696
Number of Sequences: 2352
Number of extensions: 12589
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)