Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e13
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011571-1|AAH11571.1|  903|Homo sapiens ITCH protein protein.         31   3.0  
AL356299-4|CAI17959.1|  903|Homo sapiens itchy homolog E3 ubiqui...    31   3.0  
AL356299-3|CAI17960.1|  862|Homo sapiens itchy homolog E3 ubiqui...    31   3.0  
AL109923-6|CAI21458.1|  903|Homo sapiens itchy homolog E3 ubiqui...    31   3.0  
AL109923-5|CAI21459.1|  862|Homo sapiens itchy homolog E3 ubiqui...    31   3.0  
AF095745-1|AAK39399.1|  862|Homo sapiens ubiquitin protein ligas...    31   3.0  
AF038564-1|AAC04845.1|  739|Homo sapiens atrophin-1 interacting ...    31   3.0  
AB056663-1|BAB39389.1|  862|Homo sapiens ubiquitin protein ligas...    31   3.0  

>BC011571-1|AAH11571.1|  903|Homo sapiens ITCH protein protein.
          Length = 903

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 261 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 298


>AL356299-4|CAI17959.1|  903|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 903

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 261 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 298


>AL356299-3|CAI17960.1|  862|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 862

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 220 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 257


>AL109923-6|CAI21458.1|  903|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 903

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 261 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 298


>AL109923-5|CAI21459.1|  862|Homo sapiens itchy homolog E3 ubiquitin
           protein ligase (mouse) protein.
          Length = 862

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 220 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 257


>AF095745-1|AAK39399.1|  862|Homo sapiens ubiquitin protein ligase
           ITCH protein.
          Length = 862

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 220 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 257


>AF038564-1|AAC04845.1|  739|Homo sapiens atrophin-1 interacting
           protein 4 protein.
          Length = 739

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 97  PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 134


>AB056663-1|BAB39389.1|  862|Homo sapiens ubiquitin protein ligase
           Itch protein.
          Length = 862

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 243 PMTPTKPAATNGDIDEESLSPTSEVGSVQAQNVNEQTT 356
           P TP +PA+ NG     S S  S  GS+   N N  T+
Sbjct: 220 PPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNTS 257


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,179,251
Number of Sequences: 237096
Number of extensions: 2412679
Number of successful extensions: 5175
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5175
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)