Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e13
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    27   0.13 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           27   0.13 
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   2.1  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              23   3.7  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   8.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.5  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
 Frame = +3

Query: 234 HFNPMTPTKPAATNGDIDEESL-----SPTSEVGSVQAQNVNEQT--TANDGWR--ALFE 386
           ++NP TP  P     + D  SL     +P   + S   Q+V   T  T+ +G    A F 
Sbjct: 292 YYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFI 351

Query: 387 AQQTSMKLLVEALTK-PPNLEDKNITLPK 470
           A+  ++KLL E      P   D N T+PK
Sbjct: 352 AKPEALKLLDENWDLIAPYFLDYNYTIPK 380


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
 Frame = +3

Query: 234 HFNPMTPTKPAATNGDIDEESL-----SPTSEVGSVQAQNVNEQT--TANDGWR--ALFE 386
           ++NP TP  P     + D  SL     +P   + S   Q+V   T  T+ +G    A F 
Sbjct: 292 YYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFI 351

Query: 387 AQQTSMKLLVEALTK-PPNLEDKNITLPK 470
           A+  ++KLL E      P   D N T+PK
Sbjct: 352 AKPEALKLLDENWDLIAPYFLDYNYTIPK 380


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 301 ERLSSSISPLVAAGLVGVMGL 239
           E +  SI P+V AG++ + GL
Sbjct: 49  ELIMKSIIPVVMAGIIAIYGL 69


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 345 EQTTANDGWRALFEAQQTSMKLLVEALTKPPNLEDKN 455
           +Q  AND      + +   ++L  E + K  N+ DKN
Sbjct: 40  DQQKANDVIEGNIDVEDKKVQLYCECILKNFNILDKN 76


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 121 SLLGLNCCIPTILPWITKYCIN 186
           +LLGL C I  +L  + K  IN
Sbjct: 115 NLLGLTCMIQEVLKLMKKKGIN 136


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 272 SGCGLSGRHGVKVRAQNTMDAVLSVV 195
           SG   S  HG K   Q  MDA L  +
Sbjct: 398 SGQSSSHHHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,056
Number of Sequences: 438
Number of extensions: 4756
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)