Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e07
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBP1 Cluster: Putative uncharacterized protein PF07_0...    40   0.079
UniRef50_A2EGX0 Cluster: Putative uncharacterized protein; n=1; ...    37   0.42 
UniRef50_Q7RLA0 Cluster: Putative uncharacterized protein PY0264...    35   2.3  
UniRef50_Q4RB88 Cluster: Chromosome undetermined SCAF21986, whol...    34   3.0  

>UniRef50_Q8IBP1 Cluster: Putative uncharacterized protein PF07_0086;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF07_0086 - Plasmodium falciparum
            (isolate 3D7)
          Length = 3429

 Score = 39.5 bits (88), Expect = 0.079
 Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
 Frame = -3

Query: 102  LIRFNPIFISKFAQQRK--KNVKKIYCFLFIINKF 4
            LI F+  FI+K+   +K  K +KKIYCF+ IINKF
Sbjct: 1520 LITFDYYFINKYLNIKKNFKQIKKIYCFICIINKF 1554


>UniRef50_A2EGX0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1939

 Score = 37.1 bits (82), Expect = 0.42
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = +1

Query: 115 FIENKHNLIKLYFYIAFILCI-----SVLRFQDTYIINNIMNDINVQPFNKYSQ*MIITI 279
           F +   N+I L+FY+ F  C+     S + F+D  ++ NI   I    +  Y + MI  +
Sbjct: 108 FYDKYSNIIDLFFYLFFADCVVQIYTSKMNFEDPQLLLNICYSIIPVSYESYEEPMITKV 167

Query: 280 SRHEIVIHVFLEHTYIAI 333
            R   V+  FL  + ++I
Sbjct: 168 IRQYSVLFGFLSISQLSI 185


>UniRef50_Q7RLA0 Cluster: Putative uncharacterized protein PY02646;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY02646 - Plasmodium yoelii yoelii
          Length = 1230

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = +1

Query: 115 FIENKHNLIK-LYFYIAFILCISVLR---FQDTYIINNIMNDINVQPFNKYSQ 261
           F+E  H + K  YFY  FI   ++L+   F +  IIN I N +++  FN Y Q
Sbjct: 559 FLEYIHEINKKFYFYFIFIFGTALLKYVIFLNNKIINMIQNHLSINLFNDYHQ 611


>UniRef50_Q4RB88 Cluster: Chromosome undetermined SCAF21986, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF21986, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 222

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 168 YKCNIKIQFN*IMFVFNKSIVVLIRFNPIFISKFAQQRKKNVKKIYCF 25
           Y+ N+ +    ++F+   S   L  F  + I  F QQ+KKN  +I+CF
Sbjct: 40  YEDNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKNCYQIFCF 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,174,926
Number of Sequences: 1657284
Number of extensions: 9103804
Number of successful extensions: 20699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20690
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)