Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e04
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   3.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   3.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   3.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 369 GEFLFLGTFTAKEIKKRALVNHLIC 295
           G+F++L TF   EI  +  V   +C
Sbjct: 323 GQFIYLRTFGFLEIDDQGTVESFVC 347


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +2

Query: 530 RVFCNWISDDLFMEEIVPLVVSAASAIPSLVDAFSSSKPPQTDTPPA 670
           R +  W S  +FM  +V L+ +  S    +  +  SS  P++    A
Sbjct: 201 RAYVTWYSISVFMVPLVVLIFTYTSICIEIWQSSESSLRPRSSQKSA 247


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 426 LLVITPPLCSSG*DRPPTFISSHSFRPPLFRSFCRGCF 539
           L V+   + SS   R P F+  H  +   F   C+G +
Sbjct: 20  LAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVY 57


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 426 LLVITPPLCSSG*DRPPTFISSHSFRPPLFRSFCRGCF 539
           L V+   + SS   R P F+  H  +   F   C+G +
Sbjct: 20  LAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVY 57


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 426 LLVITPPLCSSG*DRPPTFISSHSFRPPLFRSFCRGCF 539
           L V+   + SS   R P F+  H  +   F   C+G +
Sbjct: 20  LAVVFQEITSSPAGRSPAFLPHHFTKRSFFDIQCKGVY 57


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 385 VPELLCQTMLSLGFSWLSRP 444
           V ++L   +  +GFSW++ P
Sbjct: 90  VADILSGAIACIGFSWIASP 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,627
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)