Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2e04
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   9.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 22  DSLVSPPPPAHPDWDAVSP 78
           D + SPPPP  P   ++SP
Sbjct: 778 DGIGSPPPPPPPPPSSLSP 796


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +2

Query: 530 RVFCNWISDDLFMEEIVPLVVSAASAIPSLVDAFSSS 640
           R+FC+W+ +      I+ + +  +SA+ +  D  +++
Sbjct: 846 RIFCHWLCNHSTFGNIILVCIMFSSAMLAAEDPLNAN 882


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 425 SPGYHAPFMLFWIGPPAYV 481
           SP Y+ P   + + PPAY+
Sbjct: 514 SPAYYEPPHAYELNPPAYL 532


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 405  LTKKFGHFSYFEGEFLFLGTFTAKEIKKRALVNHLICWQ-ESPE 277
            ++++FG   +F  +FL    F A ++ +  L    +C   E PE
Sbjct: 878  ISRRFGGVDFFLSQFLSSHGFYAYQLHRMQLTGSPLCDACEEPE 921


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,844
Number of Sequences: 2352
Number of extensions: 14493
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)