Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d14
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.1  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 15   DGRPSP*VSCSFNTCYRT*RFRESSLFKPFSKMSETLKLRGTLRGHNG 158
            +G+P+    C   TC +  R ++SS  +P S  +    +R    G  G
Sbjct: 880  NGKPTCWRECDKATCEKLFRMKKSSALRPASGGTTARVVRCVCAGSTG 927


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 318 VLSSDGNYALSGSWDKTLRLWDL 386
           VLS  G   +S +W  +LR  D+
Sbjct: 260 VLSDHGTQFISNTWQNSLRAADI 282


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 372 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 497
           RLW  AA    R + D   DV S     D    ++  RD+ +
Sbjct: 567 RLWPRAAAFAERVWSDPQLDVTSFTIQEDVYTRLNTHRDRLV 608


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 560 GVMCQILTQSCQPHYC 607
           G +C I T  C P+ C
Sbjct: 100 GALCNINTDDCSPNPC 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 604 IMGLA*LGENLTHDTQSLCPSSWMV 530
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 604 IMGLA*LGENLTHDTQSLCPSSWMV 530
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 128 TPRNS*RPQWLGYSNCN*SEIPGHDLIFL 214
           T RN+ + QWL  S+   SEIP     FL
Sbjct: 291 TFRNTKKLQWLDTSHNRISEIPNDLFRFL 319


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 708 VSPDGSLCASGGKDMK 755
           VSP+GSL  S  ++M+
Sbjct: 18  VSPEGSLLPSNSREMR 33


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 557 LGVMCQILTQSCQPHYC 607
           LG +C+I    C+P  C
Sbjct: 253 LGYICEINVDDCRPGAC 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,164
Number of Sequences: 336
Number of extensions: 4542
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)