Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d13
         (240 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QE15 Cluster: Protein kinase, putative; n=7; Trypanos...    32   2.8  
UniRef50_A5K1B3 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_A0QZJ5 Cluster: Dihydropteroate synthase; n=1; Mycobact...    30   8.6  

>UniRef50_Q4QE15 Cluster: Protein kinase, putative; n=7;
           Trypanosomatidae|Rep: Protein kinase, putative -
           Leishmania major
          Length = 355

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 2   ILVRFFVFQL*KKIGCVHLKRRRLC 76
           IL++ F+FQL + IGC+HL    +C
Sbjct: 124 ILIKVFLFQLIRSIGCLHLPSVNVC 148


>UniRef50_A5K1B3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 548

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 152 HISVVLESPDVQTSTQ*TSQLIHLTNTIFVALDEHNQFFFTIETQK 15
           HI+VV +  D    T   S L    NT+F+  +E+N     +++++
Sbjct: 79  HITVVSKGEDGDYVTAQVSDLAQFKNTLFIMYNEYNHMLLNLQSER 124


>UniRef50_A0QZJ5 Cluster: Dihydropteroate synthase; n=1;
           Mycobacterium smegmatis str. MC2 155|Rep:
           Dihydropteroate synthase - Mycobacterium smegmatis
           (strain ATCC 700084 / mc(2)155)
          Length = 321

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -1

Query: 153 PHFSCVGISRCSNFYTMNFTIDSLDKHNLR 64
           P F+ +G  R S +Y  +FT+D+L++ + R
Sbjct: 129 PRFAVMGDGRVSPYYNQSFTVDALERRDGR 158


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,867,278
Number of Sequences: 1657284
Number of extensions: 4231516
Number of successful extensions: 7998
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7998
length of database: 575,637,011
effective HSP length: 58
effective length of database: 479,514,539
effective search space used: 10069805319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)