Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d13
         (240 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   2.6  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   2.6  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   2.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   3.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   3.4  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       21   6.0  
AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase pr...    21   7.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            21   7.9  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     21   7.9  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 125 REIPTQLKCGRTQEFIQEV 181
           R++P  +K  R QE +QE+
Sbjct: 207 RDVPASVKQHRVQEVLQEL 225


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 125 REIPTQLKCGRTQEFIQEV 181
           R++P  +K  R QE +QE+
Sbjct: 207 RDVPASVKQHRVQEVLQEL 225


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 125 REIPTQLKCGRTQEFIQEV 181
           R++P  +K  R QE +QE+
Sbjct: 185 RDVPASVKQHRVQEVLQEL 203


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 83  LTNTIFVALDEHN 45
           + NT+F+ALD H+
Sbjct: 819 VVNTLFMALDHHD 831


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 65  VALDEHNQFFFTIETQK 15
           V +DEHN+ F+ ++ +K
Sbjct: 446 VQIDEHNKNFYELKKKK 462


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 119 EHREIPTQLKCGRTQEFIQ 175
           EH + PT    GR  EF++
Sbjct: 65  EHADAPTARDPGRNPEFLR 83


>AY341231-1|AAR13795.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341230-1|AAR13794.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341229-1|AAR13793.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341228-1|AAR13792.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341227-1|AAR13791.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341226-1|AAR13790.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AY341225-1|AAR13789.1|  231|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 231

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 12  DFLCFNCEKKLVVFI 56
           +FL + CEK ++V +
Sbjct: 119 EFLAYQCEKHVLVIL 133


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 130 DSNTTEMWQNPGVYPG 177
           ++  T  W NP  +PG
Sbjct: 315 NNELTSEWINPATFPG 330


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 197 KQTIKSCLHTW 229
           K+  K+C HTW
Sbjct: 269 KEHTKNCQHTW 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,437
Number of Sequences: 2352
Number of extensions: 4916
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)