Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2d11
(596 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 31 0.028
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 27 0.35
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 27 0.35
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 25 1.4
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 3.2
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 3.2
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 3.2
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 3.2
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 4.3
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 4.3
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 4.3
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 23 7.5
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 23 7.5
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 31.1 bits (67), Expect = 0.028
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 257 ANTTIEKNLVVGALLACQLSYTD-LNITGDDFVDFILYDKT 376
A + +KNL G LAC L + D L +T +DFV I D+T
Sbjct: 754 AASKFQKNLKRGIYLACVLYHEDKLLLTNEDFVPVIEIDET 794
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.5 bits (58), Expect = 0.35
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++P PT T+ S+L P P V DP
Sbjct: 194 ATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDP 225
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.5 bits (58), Expect = 0.35
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++P PT T+ S+L P P V DP
Sbjct: 194 ATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDP 225
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 25.4 bits (53), Expect = 1.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 135 NKLLSTLSSPGPTATSVMSNLGPVP 61
N +S++SSPGP +++ S G +P
Sbjct: 211 NSPMSSVSSPGPISSNPQSPYGALP 235
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 3.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++P T T+ S+L P P V DP
Sbjct: 194 ATTTTPASTTTTTWSDLPPPPPTTTTTVWIDP 225
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++P T T+ S+L P P V DP
Sbjct: 193 ATTTTPASTTTTTWSDLPPPPPTTTTTVWIDP 224
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++P T T+ S+L P P V DP
Sbjct: 193 ATTTTPASTTTTTWSDLPPPPPTTTTTVWIDP 224
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 170 PVVELHVTLRIPINSFRRF 114
P +LH T R PI S +RF
Sbjct: 506 PADKLHYTARHPIGSLKRF 524
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++ PT T+ S+L P P V DP
Sbjct: 194 ATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDP 225
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++ PT T+ S+L P P V DP
Sbjct: 194 ATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDP 225
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 123 STLSSPGPTATSVMSNLGPVPLAVCKMVKFDP 28
+T ++ PT T+ S+L P P V DP
Sbjct: 194 ATTTTHAPTTTTTWSDLPPPPPTTTTTVWIDP 225
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 146 ASHVAPLPDLKITINEKEINVTKNIKKSDDD 238
A H P PD + E + +N+ DDD
Sbjct: 104 AGHFVPYPDDFHNVERTEACLAENLYTCDDD 134
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 146 ASHVAPLPDLKITINEKEINVTKNIKKSDDD 238
A H P PD + E + +N+ DDD
Sbjct: 104 AGHFVPYPDDFHNVERTEACLAENLYTCDDD 134
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,099
Number of Sequences: 2352
Number of extensions: 10802
Number of successful extensions: 44
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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