Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2d11
(596 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-113|AAF57305.2| 399|Drosophila melanogaster CG12754-PA... 30 2.7
AY071285-1|AAL48907.1| 263|Drosophila melanogaster RE31221p pro... 29 6.3
AE013599-3491|AAF46918.2| 263|Drosophila melanogaster CG13532-P... 29 6.3
U07629-1|AAA21249.2| 1494|Drosophila melanogaster beta-heavy-spe... 28 8.4
BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p pro... 28 8.4
AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p pro... 28 8.4
AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA... 28 8.4
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 28 8.4
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 28 8.4
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 28 8.4
>AE013599-113|AAF57305.2| 399|Drosophila melanogaster CG12754-PA
protein.
Length = 399
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 280 ILFYCCISKNVIQSIVVTLFNIFGYVYLF-FVNCYF 176
IL YC I K VIQ + T F + G V F +N +F
Sbjct: 254 ILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFF 289
>AY071285-1|AAL48907.1| 263|Drosophila melanogaster RE31221p
protein.
Length = 263
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +2
Query: 140 CAASHVAPLPDLKITINEKEINVTKNIKKSDDDGLYDIFANTTIEKN-LVVGALLACQLS 316
CA HV P P L + + ++ D GLY + T I ++ L + C
Sbjct: 163 CAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSMTVRTRIPRDQLESPTPITCAFI 222
Query: 317 YTDLNITGDDFVDFILYDKTGEL 385
N T + I YDK +
Sbjct: 223 LVGTNYTKRR--ETIFYDKASTI 243
>AE013599-3491|AAF46918.2| 263|Drosophila melanogaster CG13532-PA
protein.
Length = 263
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +2
Query: 140 CAASHVAPLPDLKITINEKEINVTKNIKKSDDDGLYDIFANTTIEKN-LVVGALLACQLS 316
CA HV P P L + + ++ D GLY + T I ++ L + C
Sbjct: 163 CAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSMTVRTRIPRDQLESPTPITCAFI 222
Query: 317 YTDLNITGDDFVDFILYDKTGEL 385
N T + I YDK +
Sbjct: 223 LVGTNYTKRR--ETIFYDKASTI 243
>U07629-1|AAA21249.2| 1494|Drosophila melanogaster beta-heavy-spectrin
protein.
Length = 1494
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 VDFILYDKTGELTSTEMPEDSTDLSASKPVSLQNASDDASQLCTSG 487
+ + YD++ + S+ P+ S PVS +N+S D SQ TSG
Sbjct: 1257 MQLLSYDESMKQQSSSSPDIKVTSSVESPVSSRNSSPD-SQRRTSG 1301
>BT003320-1|AAO25080.1| 798|Drosophila melanogaster AT11823p
protein.
Length = 798
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 DITDVAVGPGEESVERSLL--ECAASHVAPLPDLKITINEKEINVTKNIKKSDDD 238
DI G EE + + ++ +CA+ ++ P +L + +E+ +T N S+DD
Sbjct: 266 DIESSDDGTDEEQLLKDIVAADCASGYLIPNTNLGNLLQPQEVPLTDNFVASEDD 320
>AY069327-1|AAL39472.2| 552|Drosophila melanogaster LD04591p
protein.
Length = 552
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 DITDVAVGPGEESVERSLL--ECAASHVAPLPDLKITINEKEINVTKNIKKSDDD 238
DI G EE + + ++ +CA+ ++ P +L + +E+ +T N S+DD
Sbjct: 20 DIESSDDGTDEEQLLKDIVSADCASGYLIPNTNLGNLLQPQEVPLTDNFVASEDD 74
>AE014297-4076|AAF56673.2| 980|Drosophila melanogaster CG6051-PA
protein.
Length = 980
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 DITDVAVGPGEESVERSLL--ECAASHVAPLPDLKITINEKEINVTKNIKKSDDD 238
DI G EE + + ++ +CA+ ++ P +L + +E+ +T N S+DD
Sbjct: 448 DIESSDDGTDEEQLLKDIVSADCASGYLIPNTNLGNLLQPQEVPLTDNFVASEDD 502
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 VDFILYDKTGELTSTEMPEDSTDLSASKPVSLQNASDDASQLCTSG 487
+ + YD++ + S+ P+ S PVS +N+S D SQ TSG
Sbjct: 3860 MQLLSYDESMKQQSSSSPDIKVTSSVESPVSSRNSSPD-SQRRTSG 3904
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 VDFILYDKTGELTSTEMPEDSTDLSASKPVSLQNASDDASQLCTSG 487
+ + YD++ + S+ P+ S PVS +N+S D SQ TSG
Sbjct: 3860 MQLLSYDESMKQQSSSSPDIKVTSSVESPVSSRNSSPD-SQRRTSG 3904
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 350 VDFILYDKTGELTSTEMPEDSTDLSASKPVSLQNASDDASQLCTSG 487
+ + YD++ + S+ P+ S PVS +N+S D SQ TSG
Sbjct: 3860 MQLLSYDESMKQQSSSSPDIKVTSSVESPVSSRNSSPD-SQRRTSG 3904
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,728,879
Number of Sequences: 53049
Number of extensions: 463851
Number of successful extensions: 1779
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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