Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2d09
(535 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 5.2
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 5.2
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 21 5.2
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 5.2
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 21 5.2
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 5.2
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.0
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 9.0
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.4 bits (43), Expect = 5.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 510 LLLPFLCFNVYVQTNYN*FFILK*EIVRQIQLH 412
+ L F+ +N+YV + F + +I+ IQL+
Sbjct: 188 IFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLY 220
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.4 bits (43), Expect = 5.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -2
Query: 510 LLLPFLCFNVYVQTNYN*FFILK*EIVRQIQLH 412
+ L F+ +N+YV + F + +I+ IQL+
Sbjct: 114 IFLMFVSYNIYVCQTVSNFEYFQRKILLMIQLY 146
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 77 MQIFVKTLTGKTIT 90
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 153 MQIFVKTLTGKTIT 166
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 229 MQIFVKTLTGKTIT 242
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 305 MQIFVKTLTGKTIT 318
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 381 MQIFVKTLTGKTIT 394
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 457 MQIFVKTLTGKTIT 470
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 533 MQIFVKTLTGKTIT 546
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 609 MQIFVKTLTGKTIT 622
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.4 bits (43), Expect = 5.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 182 MNKFADTLTGRTIT 141
M F TLTG+TIT
Sbjct: 49 MQIFVKTLTGKTIT 62
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 20.6 bits (41), Expect = 9.0
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +3
Query: 93 YRLEHDWKRAYVSVSASDSSTGQGV 167
Y EH W++ + V ++ G G+
Sbjct: 377 YGCEHRWRQIFNMVGFRNAVQGTGI 401
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 9.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 527 LEMVLFYCYRSYAL 486
L+ V+F CY +Y +
Sbjct: 143 LKQVMFLCYSTYGI 156
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,786
Number of Sequences: 336
Number of extensions: 1972
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -