Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d08
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.4  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   4.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.7  

>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = +1

Query: 100 EILRATIDPNQRQQAEEQ---LSQIHKI 174
           EI    ++PNQRQQ E++     Q+H++
Sbjct: 12  EIRHQVLNPNQRQQLEDRRRIKEQLHQL 39


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 571 EKRTPLIEAMNLLLPMIYNLIVNLEPD 651
           E   P++E    +   + NLI NL+PD
Sbjct: 649 ESGEPVVENPKQIEEAVMNLITNLQPD 675


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 428 IVFRQTHNCTLIISGAWTIASTMMSLIIARSCSWMLNGIG 309
           + FR    C L++ G WT  +T  +     S  ++ NG+G
Sbjct: 7   LAFRVAMGCLLLL-GCWTPEATAATATSTLSGIYVDNGVG 45


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 462 LSPSLWKVMFYDSLQADTQ-LYSDYFRSLDD 373
           L P+LW VM+ D L+   + L +D     DD
Sbjct: 627 LGPTLWNVMYDDLLRLPLEGLRADIIGFADD 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,741
Number of Sequences: 2352
Number of extensions: 16223
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)