Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2d07
(798 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 351 2e-95
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 317 2e-85
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 275 7e-73
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 274 2e-72
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 250 3e-65
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 4e-62
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 223 3e-57
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 200 4e-50
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 180 3e-44
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 162 8e-39
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 162 8e-39
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 159 1e-37
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 156 5e-37
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 152 9e-36
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 151 3e-35
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 5e-35
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 148 1e-34
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 141 2e-32
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 140 4e-32
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 138 1e-31
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 133 4e-30
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 133 6e-30
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 130 3e-29
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 130 3e-29
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 126 9e-28
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 125 1e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 3e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 5e-27
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 121 2e-26
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 117 4e-25
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 111 3e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 6e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 2e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 5e-20
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 91 3e-17
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 2e-15
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 84 3e-15
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 83 8e-15
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 81 4e-14
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 80 6e-14
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 78 2e-13
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 78 2e-13
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 75 2e-12
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 75 3e-12
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 74 5e-12
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 73 1e-11
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 73 1e-11
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 71 3e-11
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 71 3e-11
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 70 6e-11
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 70 6e-11
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 69 1e-10
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 68 2e-10
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 68 3e-10
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 63 7e-09
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 63 9e-09
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 62 1e-08
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 61 4e-08
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 60 6e-08
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 60 6e-08
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 58 2e-07
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 58 2e-07
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 58 3e-07
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 8e-07
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 55 2e-06
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 55 2e-06
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 54 3e-06
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 7e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 7e-06
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 53 7e-06
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 4e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 49 1e-04
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 46 0.001
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 46 0.001
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 44 0.004
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.006
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 42 0.014
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.041
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 39 0.13
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.13
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 38 0.29
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.51
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.89
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.7
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.7
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 6.3
UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30; Bacteri... 33 6.3
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 8.3
UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;... 33 8.3
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 351 bits (862), Expect = 2e-95
Identities = 166/209 (79%), Positives = 177/209 (84%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 710
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TL
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATL 233
Query: 711 GNFXXXXXXXXXXXXXXLTPDLWRDIPLT 797
GNF LTPDLW++ T
Sbjct: 234 GNFAKATFDAISKTYSYLTPDLWKETVFT 262
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 317 bits (778), Expect = 2e-85
Identities = 139/207 (67%), Positives = 174/207 (84%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 710
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TL
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTL 206
Query: 711 GNFXXXXXXXXXXXXXXLTPDLWRDIP 791
GNF LTP+LW + P
Sbjct: 207 GNFVKAAFAAASLTYGILTPNLWAERP 233
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 275 bits (675), Expect = 7e-73
Identities = 129/206 (62%), Positives = 157/206 (76%)
Frame = +3
Query: 177 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 356
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 357 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 536
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 537 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 716
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 717 FXXXXXXXXXXXXXXLTPDLWRDIPL 794
LTP+LW + PL
Sbjct: 210 TLKAAFVAIGNTYGFLTPNLWAEQPL 235
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 274 bits (671), Expect = 2e-72
Identities = 128/204 (62%), Positives = 156/204 (76%)
Frame = +3
Query: 174 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 353
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 354 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 533
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 534 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 713
G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLG
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Query: 714 NFXXXXXXXXXXXXXXLTPDLWRD 785
N LTPDLW +
Sbjct: 225 NSVKATYEALKNSYGFLTPDLWAE 248
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 250 bits (612), Expect = 3e-65
Identities = 119/159 (74%), Positives = 129/159 (81%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 681 TSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLT 797
TSAR T +LGNF LTPDLW++ T
Sbjct: 168 TSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFT 206
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 4e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Frame = +3
Query: 192 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 371
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 372 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 551
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 552 PCKVTGKCGSVTVRLIPAP 608
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 223 bits (546), Expect = 3e-57
Identities = 105/209 (50%), Positives = 138/209 (66%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 710
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTT 194
Query: 711 GNFXXXXXXXXXXXXXXLTPDLWRDIPLT 797
NF + PD W + P T
Sbjct: 195 ENFAKASIAALEATSSMILPDQWEEKPRT 223
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 200 bits (487), Expect = 4e-50
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = +3
Query: 372 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 551
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 552 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 713
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
Score = 33.5 bits (73), Expect = 6.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 177 DQKEWVPVTKLGRLVREGKI 236
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 180 bits (439), Expect = 3e-44
Identities = 101/167 (60%), Positives = 119/167 (71%)
Frame = +3
Query: 195 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 374
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 375 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 554
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 555 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 695
CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 162 bits (394), Expect = 8e-39
Identities = 97/202 (48%), Positives = 122/202 (60%)
Frame = +3
Query: 180 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 359
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 360 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 539
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 540 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 719
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Query: 720 XXXXXXXXXXXXXXLTPDLWRD 785
L PDL ++
Sbjct: 211 TKAIFDTISKTHSYLIPDLQKE 232
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 162 bits (394), Expect = 8e-39
Identities = 82/181 (45%), Positives = 121/181 (66%), Gaps = 2/181 (1%)
Frame = +3
Query: 183 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 362
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 363 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 536
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 537 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 716
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 717 F 719
F
Sbjct: 190 F 190
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 159 bits (385), Expect = 1e-37
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WG 524
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 525 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 704
G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTR 188
Query: 705 TLGNF 719
T NF
Sbjct: 189 TTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 156 bits (379), Expect = 5e-37
Identities = 85/184 (46%), Positives = 115/184 (62%), Gaps = 6/184 (3%)
Frame = +3
Query: 186 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 353
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 354 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGN 527
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 528 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 707
+ +PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Query: 708 LGNF 719
NF
Sbjct: 194 TVNF 197
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 152 bits (369), Expect = 9e-36
Identities = 76/181 (41%), Positives = 112/181 (61%), Gaps = 2/181 (1%)
Frame = +3
Query: 183 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 362
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 363 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 536
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 537 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 716
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 717 F 719
+
Sbjct: 182 Y 182
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 151 bits (365), Expect = 3e-35
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 2/182 (1%)
Frame = +3
Query: 177 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 356
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 357 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 530
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 710
+ H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 711 GN 716
+
Sbjct: 221 NS 222
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 5e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGL 428
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 148 bits (359), Expect = 1e-34
Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 2/179 (1%)
Frame = +3
Query: 189 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 368
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 369 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 542
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 543 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 719
HTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NF
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 141 bits (342), Expect = 2e-32
Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 2/179 (1%)
Frame = +3
Query: 177 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 356
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 357 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 530
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 707
+ H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 140 bits (339), Expect = 4e-32
Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 2/178 (1%)
Frame = +3
Query: 189 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 368
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 369 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 542
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 543 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 716
+++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVN 234
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 138 bits (335), Expect = 1e-31
Identities = 95/204 (46%), Positives = 115/204 (56%)
Frame = +3
Query: 177 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 356
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 357 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 536
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 537 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 716
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL N
Sbjct: 160 SL-TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDN 216
Query: 717 FXXXXXXXXXXXXXXLTPDLWRDI 788
F LTP+LW+ +
Sbjct: 217 FDKATFNAISNTYSYLTPNLWKGL 240
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 133 bits (322), Expect = 4e-30
Identities = 79/163 (48%), Positives = 96/163 (58%)
Frame = +3
Query: 294 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 473
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 474 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 653
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 654 QMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWR 782
+MA + D + ARG T L N LT D WR
Sbjct: 115 RMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFWR 156
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 133 bits (321), Expect = 6e-30
Identities = 69/170 (40%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Frame = +3
Query: 216 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 395
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 396 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 569
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 570 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 719
+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 120 RSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 130 bits (315), Expect = 3e-29
Identities = 62/179 (34%), Positives = 107/179 (59%)
Frame = +3
Query: 243 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 422
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 423 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 602
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 603 APRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 779
AP+GTGIV++ +L+++G++DC+T + G T + N +TPD W
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 130 bits (315), Expect = 3e-29
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 15/193 (7%)
Frame = +3
Query: 183 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 347
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 348 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 503
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 504 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 677
V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDV 183
Query: 678 YTSARGSTGTLGN 716
+ + G T T N
Sbjct: 184 WVRSFGKTKTKMN 196
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 126 bits (303), Expect = 9e-28
Identities = 92/203 (45%), Positives = 115/203 (56%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 371
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 372 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 548
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 549 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 728
PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN
Sbjct: 108 YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKA 163
Query: 729 XXXXXXXXXXXLTPDLWRDIPLT 797
TP+LW++ T
Sbjct: 164 TFDAVSKTSHS-TPNLWKEAVFT 185
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 125 bits (302), Expect = 1e-27
Identities = 75/203 (36%), Positives = 120/203 (59%), Gaps = 2/203 (0%)
Frame = -2
Query: 779 PQVRSEVGICLGNGSICGFSKISQGAS*TTS*GVAVLYTSHLKKLLRNWRRHNSSTTRGR 600
PQV S+ + + +G+ G + Q + T+ GV + TS L +LL +W ++ T+
Sbjct: 27 PQVWSQETVGVTDGNESGLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSW 86
Query: 599 NQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTN 420
NQ + TTL L GV L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT+
Sbjct: 87 NQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTD 146
Query: 419 MTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEF 240
+TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R Q + +
Sbjct: 147 VTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDG 205
Query: 239 VDFSFANKTAEFGDRNP--LFLV 177
D + +++ + G+ NP FLV
Sbjct: 206 RDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 3e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 351 KQTRAGQRTRFK 386
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 115 bits (277), Expect = 1e-24
Identities = 54/80 (67%), Positives = 58/80 (72%)
Frame = +3
Query: 558 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 737
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 738 XXXXXXXXLTPDLWRDIPLT 797
LTPDLW++ T
Sbjct: 185 AISKTYSYLTPDLWKETVFT 204
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 5e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +3
Query: 180 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 359
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 360 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 467
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +2
Query: 500 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 679
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 680 H 682
H
Sbjct: 229 H 229
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 121 bits (292), Expect = 2e-26
Identities = 65/124 (52%), Positives = 77/124 (62%)
Frame = +3
Query: 348 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 527
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 528 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 707
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 708 LGNF 719
L NF
Sbjct: 112 LYNF 115
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 117 bits (281), Expect = 4e-25
Identities = 79/167 (47%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 531 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 668
IG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 111 bits (266), Expect = 3e-23
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = -2
Query: 563 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 384
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 383 ETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 204
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 203 GDRNPLFLVFL 171
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 6e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 351 KQTRAGQRTRFK 386
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 101 bits (242), Expect = 2e-20
Identities = 50/80 (62%), Positives = 54/80 (67%)
Frame = +3
Query: 558 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 737
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 738 XXXXXXXXLTPDLWRDIPLT 797
LTPDLW++ T
Sbjct: 184 AISKIYSYLTPDLWKETVFT 203
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 2e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +3
Query: 231 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 410
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 411 NGHIG 425
NG+ G
Sbjct: 62 NGYAG 66
Score = 69.7 bits (163), Expect = 8e-11
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +2
Query: 404 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 583
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 584 NSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGKFC*SHI-CC 739
+W+ + + + EA+ D W LLHLS + H G+ H+ CC
Sbjct: 119 AGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGCC 171
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 100 bits (239), Expect = 5e-20
Identities = 48/66 (72%), Positives = 50/66 (75%)
Frame = +3
Query: 522 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 701
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 702 GTLGNF 719
+L F
Sbjct: 67 ASLDYF 72
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = +3
Query: 600 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 779
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 780 RDIPLT 797
++ T
Sbjct: 61 KETVFT 66
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 2e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +3
Query: 219 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 398
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 399 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 497
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +3
Query: 195 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 374
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 375 TRFKAFVAIGDNNGHIGL 428
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/133 (34%), Positives = 75/133 (56%)
Frame = +3
Query: 312 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 491
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 492 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 671
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 672 DCYTSARGSTGTL 710
D YT +RG+ +
Sbjct: 161 DIYTKSRGANAPM 173
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 83.0 bits (196), Expect = 8e-15
Identities = 43/126 (34%), Positives = 71/126 (56%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 681 TSARGS 698
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 80.6 bits (190), Expect = 4e-14
Identities = 44/137 (32%), Positives = 75/137 (54%)
Frame = +3
Query: 306 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 485
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 486 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 665
K + + V I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 666 VQDCYTSARGSTGTLGN 716
Q+ G+ L N
Sbjct: 181 YQNARGKQLGTDNALNN 197
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 80.2 bits (189), Expect = 6e-14
Identities = 46/128 (35%), Positives = 73/128 (57%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
++ V +G T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 675 CYTSARGS 698
T + GS
Sbjct: 124 ILTKSLGS 131
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 78.2 bits (184), Expect = 2e-13
Identities = 70/204 (34%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Frame = +3
Query: 189 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 368
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 369 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 539
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 540 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 707
P P ++ S+ LI AP T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 708 LGNFXXXXXXXXXXXXXXLTPDLW 779
LG LTPDLW
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLW 223
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/132 (33%), Positives = 73/132 (55%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 675 CYTSARGSTGTL 710
Y+ G +L
Sbjct: 191 VYSKNLGKNTSL 202
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 75.4 bits (177), Expect = 2e-12
Identities = 44/128 (34%), Positives = 70/128 (54%)
Frame = +3
Query: 318 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 497
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 498 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 677
+ + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 678 YTSARGST 701
T + GS+
Sbjct: 143 LTKSWGSS 150
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 231 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 410
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 411 NGHIGLGVKCSKEVATAIRGAIIL 482
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 74.5 bits (175), Expect = 3e-12
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 497
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 498 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+PV G T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 675 CYTSARGSTGTL 710
T + GST L
Sbjct: 127 ILTKSLGSTNPL 138
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 73.7 bits (173), Expect = 5e-12
Identities = 40/132 (30%), Positives = 72/132 (54%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 681 TSARGSTGTLGN 716
GS L N
Sbjct: 262 GKQLGSNNALNN 273
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 72.5 bits (170), Expect = 1e-11
Identities = 41/141 (29%), Positives = 74/141 (52%)
Frame = +3
Query: 294 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 473
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 474 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 653
++ AK SV+ V + T+P +V K + ++PA GTG+++ + +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 654 QMAGVQDCYTSARGSTGTLGN 716
++AGVQ+ G L N
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/132 (27%), Positives = 74/132 (56%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 681 TSARGSTGTLGN 716
+ GS L N
Sbjct: 181 AKSLGSKSPLNN 192
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 71.3 bits (167), Expect = 3e-11
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 501 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
PV G T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ +
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITN 128
Query: 675 CYTSARGS 698
+ GS
Sbjct: 129 MLSKELGS 136
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 70.9 bits (166), Expect = 3e-11
Identities = 42/132 (31%), Positives = 69/132 (52%)
Frame = +3
Query: 300 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 479
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 480 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 659
AK +++ V + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 660 AGVQDCYTSARG 695
AG+ D Y + G
Sbjct: 150 AGIADVYAKSLG 161
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 70.1 bits (164), Expect = 6e-11
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +3
Query: 309 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 488
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 489 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAG 665
+ VR G T+P G+ G+ L PA +GTGIV+ + +L++ G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 666 VQDCYTSARGS 698
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 70.1 bits (164), Expect = 6e-11
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 495 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 668
V+ P+ G TVP V G G+ + ++PA RGTG+V+ K + ++AG
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGY 137
Query: 669 QDCYTSARGST 701
D T GST
Sbjct: 138 TDVLTKIIGST 148
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 69.3 bits (162), Expect = 1e-10
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 494
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++++AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 675 CYTSARG 695
YT G
Sbjct: 178 IYTKNLG 184
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/132 (29%), Positives = 69/132 (52%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 681 TSARGSTGTLGN 716
S L N
Sbjct: 299 GKQIRSKNALNN 310
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/132 (28%), Positives = 71/132 (53%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 681 TSARGSTGTLGN 716
GS L N
Sbjct: 141 AKQLGSDNLLNN 152
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 66.5 bits (155), Expect = 7e-10
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = -3
Query: 718 KFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 539
K PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
Query: 538 FPILLPQ*PLRTGKTDN 488
LLP P+ + DN
Sbjct: 71 ACCLLP--PVASTHRDN 85
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 63.3 bits (147), Expect = 7e-09
Identities = 43/131 (32%), Positives = 63/131 (48%)
Frame = +3
Query: 306 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 485
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 486 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 665
K + V R T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 666 VQDCYTSARGS 698
+ D T + GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 62.9 bits (146), Expect = 9e-09
Identities = 43/130 (33%), Positives = 63/130 (48%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V IG T P V G+ + V L PA GTG+++ + +L+ AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 681 TSARGSTGTL 710
+ GS +
Sbjct: 156 AKSLGSDNAI 165
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/132 (26%), Positives = 66/132 (50%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 681 TSARGSTGTLGN 716
GS L N
Sbjct: 132 AKQLGSNNPLNN 143
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 60.9 bits (141), Expect = 4e-08
Identities = 39/126 (30%), Positives = 66/126 (52%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 501 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 680
V I TVP + K + V L PAP+G GI+++ + ++++AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 681 TSARGS 698
T + GS
Sbjct: 204 TKSYGS 209
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +3
Query: 306 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 485
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 486 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 659
K +++ P+R G + G+ G+ G+ V L AP GTGI++ + + +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 660 AGVQDCYTSARGST 701
GV D T + G++
Sbjct: 167 LGVADVVTKSVGTS 180
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 60.1 bits (139), Expect = 6e-08
Identities = 40/128 (31%), Positives = 64/128 (50%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+ V + PH +V G G+ V L PA GTG+++ + +L+ AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 675 CYTSARGS 698
T GS
Sbjct: 128 ILTKCLGS 135
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/128 (28%), Positives = 63/128 (49%)
Frame = +3
Query: 318 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 497
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 498 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 677
+ V T+P +V K G V L PA GTG+++ + +L++AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 678 YTSARGST 701
+ G++
Sbjct: 128 LAKSLGAS 135
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 278
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = +3
Query: 303 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 482
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 483 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 656
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ + + +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 657 MAGVQDCYTSARGS 698
G+ D T + G+
Sbjct: 127 ACGIHDILTKSYGT 140
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 58.4 bits (135), Expect = 2e-07
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 495 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 668
++ PV G T+P + G +V L PA GTG+ + + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 669 QDCYTSARGST 701
D ++GS+
Sbjct: 126 TDVLAKSKGSS 136
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 58.0 bits (134), Expect = 3e-07
Identities = 39/128 (30%), Positives = 63/128 (49%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
++ V K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 675 CYTSARGS 698
T + GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 57.2 bits (132), Expect = 4e-07
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 494
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+P+R G T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 675 CYTSARGST 701
+ GS+
Sbjct: 135 VVAKSTGSS 143
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 8e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 189 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 302
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 55.2 bits (127), Expect = 2e-06
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 495 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 668
++ P+R G T+ K G+ + + PAP GTGIV+ +K +M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 669 QDCYTSARGST 701
D + GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 55.2 bits (127), Expect = 2e-06
Identities = 38/132 (28%), Positives = 64/132 (48%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
++ + G+ I PH V G + L PA GTGIV+ + +L+MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 675 CYTSARGSTGTL 710
+ GS +
Sbjct: 126 IVAKSLGSNNPM 137
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/129 (27%), Positives = 64/129 (49%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
++ V N I T+ V G+ G+ V + PA GTGI++ + + ++ GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 675 CYTSARGST 701
GST
Sbjct: 133 ILAKCLGST 141
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 53.2 bits (122), Expect = 7e-06
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +3
Query: 327 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 506
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 507 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 683
+R + HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKA 115
Query: 684 SARGS 698
GS
Sbjct: 116 KIHGS 120
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +3
Query: 381 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 560
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 561 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 692
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 53.2 bits (122), Expect = 7e-06
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Frame = +3
Query: 321 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 494
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+P+R G T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 675 CYTSARGST 701
+ G++
Sbjct: 124 IVAKSMGTS 132
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -3
Query: 337 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 176
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 612 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 719
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/125 (27%), Positives = 59/125 (47%)
Frame = +3
Query: 327 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 506
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 507 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 686
+ + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 687 ARGST 701
+ GS+
Sbjct: 133 SIGSS 137
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 46.0 bits (104), Expect = 0.001
Identities = 36/121 (29%), Positives = 58/121 (47%)
Frame = +3
Query: 312 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 491
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 492 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 671
++ PV R Y + T+ V GK G+V ++L+ P G G+ + ++ + AG+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIH 366
Query: 672 D 674
D
Sbjct: 367 D 367
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +3
Query: 345 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 521
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 522 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
N+ T+ VT K V L+ P G G+ ++ + AG+ D
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHD 452
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/124 (27%), Positives = 59/124 (47%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
++P+RR Y + T+ KV K V + P G G+ + ++ ++AG++D
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKD 362
Query: 675 CYTS 686
S
Sbjct: 363 LSAS 366
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 345 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 524
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 525 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
N+ T+ +VT K VRL P G G+ + ++ + AG++D
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRD 425
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 43.6 bits (98), Expect = 0.006
Identities = 34/121 (28%), Positives = 58/121 (47%)
Frame = +3
Query: 312 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 491
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 492 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 671
++ P+RR Y + T+ VT K V++ P G G+ + ++ + AG+Q
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQ 354
Query: 672 D 674
D
Sbjct: 355 D 355
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 42.3 bits (95), Expect = 0.014
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Frame = +3
Query: 318 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 494
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
Query: 675 CYTSARGSTGTL 710
+ GS L
Sbjct: 261 MTCNVYGSRNPL 272
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 40.7 bits (91), Expect = 0.041
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Frame = +3
Query: 312 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA-- 485
+L+ + + V T G+ A V G+ G +G G + A R A A
Sbjct: 189 NLHRHAIVLKRVVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVK 248
Query: 486 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 665
L + + +G G++ TV ++ K G+ V L P P G G+ PV + + G
Sbjct: 249 NLDSVAIHKGSDGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVG 303
Query: 666 VQDCYTSARGST 701
+ D S GST
Sbjct: 304 ITDLSASIYGST 315
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 39.1 bits (87), Expect = 0.13
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = +3
Query: 366 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 545
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 546 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 698
TV + GS + + P G G+V K ++ G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.13
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -2
Query: 416 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 240
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 239 VDFSFANKTAEFGDRNPLFLVFL 171
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 37.9 bits (84), Expect = 0.29
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 609 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRD 785
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTE 63
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 476 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 378
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 36.3 bits (80), Expect = 0.89
Identities = 31/120 (25%), Positives = 51/120 (42%)
Frame = +3
Query: 315 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 494
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 495 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 674
+ PV R Y + T+ V GK +V V+L+ P G G+ + + + G+ D
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +3
Query: 303 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 482
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 483 AKLSVL 500
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 300 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 464
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 6.3
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 237 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 410
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 411 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 500
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30;
Bacteria|Rep: Exodeoxyribonuclease III - Frankia sp.
(strain CcI3)
Length = 304
Score = 33.5 bits (73), Expect = 6.3
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 468 GAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK 647
G IL++ ++ V RG G+ G P P + CG + + + P G I K
Sbjct: 74 GVAILSRDTLDDVARGLPGDP-GFPGPEPRAIAATCGGIRIWSLYVPNGRTIDDPHYAYK 132
Query: 648 LLQMAGVQDCYTSA--RGSTGTLGNF 719
L +A +++ A +G+ TLG+F
Sbjct: 133 LAWLAALREVVAEATTQGAVMTLGDF 158
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 384 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 536
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Heat shock protein
DnaJ domain protein - Geobacter bemidjiensis Bem
Length = 441
Score = 33.1 bits (72), Expect = 8.3
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -2
Query: 656 LKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDL---VTPVTSSNW*NRQL 486
L+++LR+WRRH+ N + ++A + + DL V + SS +L
Sbjct: 161 LREILRSWRRHHPERQPESNDTKAELARVKREIAVEAQAVHDLSAQVEQLRSSYVCRFKL 220
Query: 485 SKDNSASNGSGDFLAALHTQTNMTVVVA 402
DNS + GS D A + +M VV A
Sbjct: 221 RVDNSLAEGS-DLFAEMIAAADMNVVRA 247
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 327 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 473
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,446,390
Number of Sequences: 1657284
Number of extensions: 17940467
Number of successful extensions: 51784
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 48527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51553
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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