Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2d02
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 5e-50
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 189 1e-48
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 186 1e-47
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 173 1e-43
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 167 4e-42
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 163 7e-41
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 156 1e-38
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 154 4e-38
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 3e-36
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 146 1e-35
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 2e-35
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 145 3e-35
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 142 2e-34
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 3e-34
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 139 1e-33
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 8e-31
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 125 2e-29
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 124 7e-29
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 120 7e-28
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 120 1e-27
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 111 3e-25
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 9e-25
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 105 2e-23
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 103 8e-23
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 96 2e-20
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 95 3e-20
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 93 2e-19
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 88 4e-18
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 81 7e-16
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 81 9e-16
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 78 5e-15
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 62 5e-15
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 77 1e-14
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 76 3e-14
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 75 6e-14
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 75 6e-14
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 68 7e-12
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 66 2e-11
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 66 2e-11
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 66 2e-11
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 64 1e-10
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 61 6e-10
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 60 2e-09
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 59 2e-09
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 59 3e-09
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 58 5e-09
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 57 9e-09
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 56 2e-08
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 56 2e-08
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 56 2e-08
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 55 4e-08
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 55 5e-08
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 54 7e-08
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 54 7e-08
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 53 2e-07
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 52 3e-07
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 50 2e-06
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 49 3e-06
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 48 6e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 46 2e-05
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 44 7e-05
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 42 4e-04
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 42 5e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 42 5e-04
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 40 0.001
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 40 0.001
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 39 0.004
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 38 0.006
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 38 0.006
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 36 0.025
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 35 0.057
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 35 0.057
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 34 0.076
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 34 0.076
SB_28072| Best HMM Match : VWA (HMM E-Value=0) 33 0.13
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 33 0.23
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 33 0.23
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 31 0.70
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.93
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 30 1.6
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 29 2.1
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9) 29 2.8
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 29 3.8
SB_47097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 28 5.0
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 28 6.6
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 28 6.6
SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 194 bits (473), Expect = 5e-50
Identities = 95/189 (50%), Positives = 134/189 (70%), Gaps = 21/189 (11%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFS---------------------DNHFTTTFISTIGI 196
YD LFKLLLIGDSGVGK+C+L RF+ D+ +T ++ISTIG+
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGV 64
Query: 197 DFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWL 376
DFKI+T+EL GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T++++F+++ +WL
Sbjct: 65 DFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL 124
Query: 377 RNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFS 556
+ ID +A E+V K+++GNKCD+ K+VV + A G+ F+ETSAK N+++AF
Sbjct: 125 QEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFM 184
Query: 557 ELAEAILDK 583
+A I ++
Sbjct: 185 TMAAEIKNR 193
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 189 bits (461), Expect = 1e-48
Identities = 87/168 (51%), Positives = 120/168 (71%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
YD LFKLLLIGDSGVGK+ +L RF+D+ F+ T+ISTIG+DFKI+T+ + GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDT 64
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 439
AGQERF T+TT+YYR A GI+L+YD+ +TF + +WL + E+A E V +++GNKCD
Sbjct: 65 AGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCD 124
Query: 440 MEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDK 583
+ + R V + A + I F+ETSAK + N++ F +A + K
Sbjct: 125 LIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAK 172
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 186 bits (453), Expect = 1e-47
Identities = 81/118 (68%), Positives = 104/118 (88%)
Frame = +2
Query: 227 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED 406
GKKIKLQIWDTAGQERFHTITT+YYRGAMGIMLVYD+TNEK+F +I KWL+ ID+HANED
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 407 VEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 580
V++M++GNKCDM +KRV+S+ +GE +A +GI F+ETSA +NIN++++F L E IL+
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILN 119
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 173 bits (420), Expect = 1e-43
Identities = 73/148 (49%), Positives = 108/148 (72%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
YD L+K++LIGDSGVGK+ +L RF+ N F STIG++F +++++ GK IK Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 439
AGQER+ IT++YYRGA+G +LVYD+T +KTF D+ +WL + EHA+ + M++GNKCD
Sbjct: 69 AGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCD 128
Query: 440 MEEKRVVSKERGEAIAREHGIRFMETSA 523
++ R V+ + + EHG+ F+E SA
Sbjct: 129 LKHLRAVASDDAKKYGDEHGLAFIEASA 156
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 167 bits (407), Expect = 4e-42
Identities = 80/168 (47%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Frame = +2
Query: 74 KTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIW 253
KT + +FK++ IGDSGVGK+ L RF + + +F +TIG+DF+IKT+ + G+ I +Q+W
Sbjct: 891 KTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLW 950
Query: 254 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNK 433
DTAGQERF +IT Y+R A GI++ YD+T E +F ++ KW+ +++E A E V KM+LGNK
Sbjct: 951 DTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNK 1010
Query: 434 CDM---EEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAE 568
D+ EE RVV G+ +A ++ +METSAK NI A +LAE
Sbjct: 1011 TDLAEDEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKLAE 1058
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 163 bits (397), Expect = 7e-41
Identities = 78/170 (45%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
Frame = +2
Query: 71 KKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGK-KIKLQ 247
K Y F+++LIGDS VGK+ +L +F++ F T+G+DF ++ +EL+G +IKLQ
Sbjct: 7 KPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQ 66
Query: 248 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANE-DVEKMIL 424
IWDTAGQERF +IT SYYR +G +++YDITN +F +++ W + + E +V M++
Sbjct: 67 IWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLV 126
Query: 425 GNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
G+K D E KRVVS E GE A H + F+ETSAK NI+ AF +AE +
Sbjct: 127 GHKIDKESKRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 156 bits (379), Expect = 1e-38
Identities = 72/92 (78%), Positives = 83/92 (90%)
Frame = +2
Query: 308 AMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIA 487
A GIMLVYDIT EKTFD+I KWLRNI+EHANEDVEKMILGNKCDM+++R+VS+ERGE IA
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Query: 488 REHGIRFMETSAKANINIDRAFSELAEAILDK 583
REHGIRF+ETSAK NINI++AF LA+ IL K
Sbjct: 185 REHGIRFLETSAKTNINIEQAFQYLAQDILKK 216
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +2
Query: 65 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTI 190
MAKK+YD LFKLLLIGDSGVGKTCILFRFSD+ F TTFISTI
Sbjct: 1 MAKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 154 bits (374), Expect = 4e-38
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 6/170 (3%)
Frame = +2
Query: 89 LFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 268
+FK++L GD+ VGK+ + R N F + ST+G+DF++KT+ + GK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 269 ERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM-- 442
ERF +I SY+R A G++L+YD+T E +F D+ W+ I+E ++ V M+ GNK D+
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 443 ----EEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 580
E K V++ E G +A+EHG F+ETS+K N NI A ELA + D
Sbjct: 562 SAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARMLRD 611
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 148 bits (359), Expect = 3e-36
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
FK+L++GD GVGKT ++ RF+ +F ST+G+D + +++ G ++KLQ WDTAGQE
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQE 71
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME-E 448
+F IT SYYR A ++LV+DITN TF I +WL N+ ++ N+++ K+++GNK D++
Sbjct: 72 KFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGA 131
Query: 449 KRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
R V+ +A + ++ETSAK + N++ +ELAE +
Sbjct: 132 SRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQL 173
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 146 bits (354), Expect = 1e-35
Identities = 65/167 (38%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 262
D +FK+L++GD VGK+ ++ RF D+ F +TIG+DF I +L GKK+KLQ+WDTA
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTA 67
Query: 263 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILGNKCD 439
G+E++ ++ S++RGA G +LV+D++ +++FD I WL + + D +++GNKCD
Sbjct: 68 GEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD 127
Query: 440 MEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 580
++K+ VS+E + ++ + + ++ETSAK N N++ AF +A +++
Sbjct: 128 KKDKK-VSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKLVE 173
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 146 bits (353), Expect = 2e-35
Identities = 63/138 (45%), Positives = 97/138 (70%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
Y LFK++L+GD+ VGKTC++ +F+ +F TIG+DF IKTV++ G+K+KLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCD 439
AGQERF +IT SYY A G+++ YDITN+K+F+ + +WL + + + ++DV I+GNK D
Sbjct: 64 AGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSD 123
Query: 440 MEEKRVVSKERGEAIARE 493
+ R V + + ++
Sbjct: 124 LSTNRKVDFHHAKLLLKK 141
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 145 bits (351), Expect = 3e-35
Identities = 62/99 (62%), Positives = 83/99 (83%)
Frame = +2
Query: 68 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 247
A + +D +FKLL+IG+S VGKT LFR++D+ FT+ F+ST+GIDFK+KTV K++KLQ
Sbjct: 14 ADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQ 73
Query: 248 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI 364
IWDTAGQER+ TITT+YYRGAMG +L+YDITNE++F +
Sbjct: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 142 bits (344), Expect = 2e-34
Identities = 62/127 (48%), Positives = 94/127 (74%)
Frame = +2
Query: 164 FTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN 343
F+ ++I+TIG+DFKI+T+ + G+K+KLQIWDTAGQERF TIT++YYRG G+++VYD+T+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 344 EKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSA 523
TF ++ +WL ID++ +DV ++++GNK D K+VV + + IR ETSA
Sbjct: 62 ADTFVNVKRWLHEIDQNC-DDVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSA 120
Query: 524 KANINID 544
K NIN++
Sbjct: 121 KENINVE 127
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 141 bits (342), Expect = 3e-34
Identities = 60/116 (51%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K+L++G+SGVGK+ +L RF+D+ F +TIG+DFK+KT+ + G K KL IWDTAGQER
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILGNKCD 439
F T+T SYYRGA G++LVYD + +TFD + +WL ++ ++ +D+ KM++GNK D
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKID 125
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 139 bits (337), Expect = 1e-33
Identities = 65/154 (42%), Positives = 97/154 (62%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
FKL+L+G+S VGK+ ++ RF F STIG F +TV L +K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEK 451
R+H++ YYRGA ++VYDITN+ TF W++ + A+ ++ + GNK D+ K
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASK 141
Query: 452 RVVSKERGEAIAREHGIRFMETSAKANINIDRAF 553
R+V E ++ A ++G+ FMETSAK +N++ F
Sbjct: 142 RMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIF 175
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 130 bits (314), Expect = 8e-31
Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
FK+++IGDS VGKTC+ +R F +TIG+DF K++EL G+ +KLQ+WDTAGQE
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQE 106
Query: 272 RFH-TITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA-NEDVEKMILGNKCDME 445
RF ++ YYR ++ +YDIT + +F+ + W+ HA + DV K+++GNKCD+
Sbjct: 107 RFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLG 166
Query: 446 EKRVVSKERGEAIAREHGIRFMETSAKANINIDR 547
+R VS A H + E S K + +++
Sbjct: 167 LERTVSSNIARKFADSHNMPLWEISIKNDAELEQ 200
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 129 bits (311), Expect = 2e-30
Identities = 62/158 (39%), Positives = 98/158 (62%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K++ +GD GVGK+ + RF + F + TIGIDF KTV L +++LQIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 454
F + SY R + ++V+DITN +F+ + W++ + + E +I+GNK D ++R
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRR 284
Query: 455 VVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAE 568
VS + E A G+ ++ETSAK+ N+ F++L++
Sbjct: 285 KVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSK 322
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 125 bits (302), Expect = 2e-29
Identities = 57/133 (42%), Positives = 88/133 (66%)
Frame = +2
Query: 185 TIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDI 364
TIG++F K V + GK +KLQIWDTAGQERF ++T SYYRGA G +LVYDI++ +TF+ +
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Query: 365 VKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINID 544
WL + A+ ++ +++GNK D++ R V+ A+E+ + F+ETSA N++
Sbjct: 187 TNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVE 246
Query: 545 RAFSELAEAILDK 583
F + + IL+K
Sbjct: 247 EGFLKCSRTILNK 259
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 124 bits (298), Expect = 7e-29
Identities = 62/164 (37%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Frame = +2
Query: 89 LFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 268
LFK++L+G++GVGKT + +R +NHFT +TIGID K V++ K++ L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 269 ERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEE 448
ERF T+T +YYRGA +L++++ + + ++ W+ + DE D K+++ NK D++E
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC-PDALKVLVANKIDLDE 129
Query: 449 KRVVSKERGEAIAREHGIRF-METSAKANINIDRAFSELAEAIL 577
+ V+ E E A H SAK I +A +++A+A+L
Sbjct: 130 Q--VTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALL 171
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 120 bits (290), Expect = 7e-28
Identities = 55/116 (47%), Positives = 81/116 (69%), Gaps = 11/116 (9%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV-----------ELRG 229
+ L K L +GDSGVGKT +L++++D+HF F+ TIGIDF+ K V RG
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRG 163
Query: 230 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHA 397
++I LQ+WDTAGQERF ++TT+++R AMG +LV+D+T+E++F +I WL + HA
Sbjct: 164 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +2
Query: 416 MILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
++LGNK D+E+ RVV + A+A G+++ ETSA N+ ++ L + ++
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVM 523
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 120 bits (288), Expect = 1e-27
Identities = 64/170 (37%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFI-STIGI-DFKIKTVELRGKKIKLQIW 253
+D FK L+IG+SGVGK+C++ + + HF F+ ST+ + D + KKIKL I
Sbjct: 347 WDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIG 406
Query: 254 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW--LRNIDEHANEDVEKMILG 427
DTAGQER+ +I +Y+RG G+ LV+DIT E TF + +W L A+ +++ +++G
Sbjct: 407 DTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVG 466
Query: 428 NKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
NK DME+ R V+ R + A +G ++ETSAK ++ F ++ + ++
Sbjct: 467 NKKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMFKKMLQLLV 516
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 113 bits (272), Expect = 1e-25
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Frame = +2
Query: 104 LIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHT 283
L D GVGK+ ++ RF F T TIG++F K V+L G+ LQIWDTAGQERF +
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 284 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI----DEHANEDVEKMILGNKCDMEEK 451
+ T +YRG+ +LVY + + K+F ++ W + D ++ ++LGNK D+ E
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDV-EG 334
Query: 452 RVVSKERGEAIAREH-GIRFMETSAKANINIDRAF 553
R VS+E ++ R++ G+ + ETSAK + N++ AF
Sbjct: 335 RAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 111 bits (268), Expect = 3e-25
Identities = 53/117 (45%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Frame = +2
Query: 236 IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEK 415
+KLQIWDTAGQERF TIT SYYR G+++ YDIT TF ++++W ++ ++A E+ K
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 416 MILGNKCDMEEKRVVSKERGEAIAREHG-IRFMETSAKANINIDRAFSELAEAILDK 583
+++GNK D+E +R VS E A +G + +ETSAK NI+ AF LA + ++
Sbjct: 155 LLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLARELKNR 211
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 110 bits (264), Expect = 9e-25
Identities = 57/173 (32%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVE-LRGKKIKLQIWD 256
Y FK+L++GD GK + R+ +N + + TIG+DF +KT++ + I+LQIW
Sbjct: 15 YTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWL 74
Query: 257 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE----HANEDVEKMIL 424
AGQERF ++T YY+GA ++++D+ + T D +KW +++D H+ + V +++
Sbjct: 75 IAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILV 134
Query: 425 GNKCDMEEKRVVSKERGEAIAREHG-IRFMETSAKANINIDRAFSELAEAILD 580
GNK D+ + R V KE + + +EH + + E S K +IN+ + L + +++
Sbjct: 135 GNKSDLPD-RPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLME 186
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 105 bits (253), Expect = 2e-23
Identities = 46/106 (43%), Positives = 71/106 (66%)
Frame = +2
Query: 266 QERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME 445
QER+ IT++YYRGAMG +LVYDI +F ++ KW+ + +HA++D+ +++GNK D++
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 446 EKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDK 583
R++ RG+ A EHG+ FMETSA + N+ AF + I DK
Sbjct: 62 HLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDK 107
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 103 bits (248), Expect = 8e-23
Identities = 47/108 (43%), Positives = 73/108 (67%)
Frame = +2
Query: 251 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGN 430
W+ AGQERF TIT+SYYRGA G+M+VYDIT ++++++ KWL ++ +A+E V +++GN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 431 KCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
K D++ R V + + A H + F+ETSAK N+ AF L+ +
Sbjct: 433 KIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSRLL 480
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 96.3 bits (229), Expect = 2e-20
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +2
Query: 299 YRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGE 478
Y GIMLVYDITN+K+F+ W+RNI+EHA++DVEKM+LGNKCDME++R VSKERGE
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 95.5 bits (227), Expect = 3e-20
Identities = 46/164 (28%), Positives = 89/164 (54%)
Frame = +2
Query: 86 LLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAG 265
++ L +GD G GKT + R F +I+T+G++ IK +WDTAG
Sbjct: 31 IVVSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAG 90
Query: 266 QERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME 445
QE+F + YY ++++D+T+ T+ ++ W R++ E E++ ++ GNK D++
Sbjct: 91 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDIK 149
Query: 446 EKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
+++V K + R+ +++ + SAK+N N ++ F LA ++
Sbjct: 150 DRKV--KAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLV 191
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 230 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDV 409
K K IWDTAGQERF ++ YYR A +LVYDIT E TF + W+R + + +D+
Sbjct: 7 KAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDI 66
Query: 410 EKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSEL 562
+ GNKCD ++R V + + A F ETSA + N+ F EL
Sbjct: 67 VIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLFEEL 117
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/91 (40%), Positives = 64/91 (70%)
Frame = +2
Query: 311 MGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAR 490
+GI+LVYDIT E +F I +WL+NI+++A+ +V K++LGNK D E++RV+ +RG ++
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 491 EHGIRFMETSAKANINIDRAFSELAEAILDK 583
++ + F E SA+ N+ +AF +A I ++
Sbjct: 63 DNNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 88.2 bits (209), Expect = 4e-18
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Frame = +2
Query: 71 KKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 250
+K D +KL+++G GVGK+ + +F +HF + + TI ++ + V + + L I
Sbjct: 5 QKDVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDI 63
Query: 251 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-G 427
DTAGQE F + Y R G +LV+ +T+ +F++I K+ I + MI+ G
Sbjct: 64 LDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICG 123
Query: 428 NKCDMEEKRVVSKERGEAIARE 493
NK D+E +R VS G+ +AR+
Sbjct: 124 NKSDLEYERTVSTAEGQELARQ 145
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 81.0 bits (191), Expect = 7e-16
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +2
Query: 248 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW----LRNIDEHANEDVEK 415
IWDTAGQERF ++ ++YRGA +LV+D+T +F + W L E+
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 416 MILGNKCDMEEKRVVSKERGEAIAR-EHGIRFMETSAKANINIDRAFSELAEAIL 577
++LGNK D+ E R VS +R +A ++ I + ETSAK IN+++AF +A+ L
Sbjct: 61 VVLGNKIDL-ENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNAL 114
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 80.6 bits (190), Expect = 9e-16
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Frame = +2
Query: 191 GIDFKIKTVELRGK-KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIV 367
G+ + + GK K K I DTAGQE + + Y R G + V+ + N K+F+DI
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 368 KWLRNIDEHAN-EDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINID 544
++ I + E+V +++GNKCD+ + R VS + +A+ + I F ETSAK +D
Sbjct: 321 QYREQIKRVKDAEEVPMVLVGNKCDLPQ-RTVSTSDAQELAKSYNIPFQETSAKTRQGVD 379
Query: 545 RAFSELAEAI 574
AF L I
Sbjct: 380 DAFYTLVREI 389
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 79.0 bits (186), Expect = 3e-15
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
KL+++GD GKTC+L FS + F ++ T+ ++ + +E+ GK+++L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 5989
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCD--ME 445
+ + Y I++ + I + + ++I KW + +H +V +++GNK D M+
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRMD 6048
Query: 446 E--KRVVSKERGEAIAREHG---------IRFMETSAKANINIDRAFSELAEAIL 577
E KR + K + E + E G ++E SAK + F A L
Sbjct: 6049 ENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAAL 6103
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 78.2 bits (184), Expect = 5e-15
Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Frame = +2
Query: 197 DFKIKTVELRGKKIKLQIWDTAGQER--FHTITTSY---YRGAMGIMLVYDITNEKTFDD 361
DF + +ELRGK + L I DT G+ R FH ++ YR G ++V+D+T+ K+F+
Sbjct: 5 DF-FERLELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFER 63
Query: 362 IVKWLRNIDEHANEDVEKMILGNKCD--MEEKRVVSKERGEAIAREHGIRFMETSAKANI 535
+ WL + EH ++ +++GNK D + ++ S + A +G ++ETSA
Sbjct: 64 VPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAK-YATNNGFLYIETSALGMC 122
Query: 536 NIDRAFSELAEAILDK 583
NID F+ L E ++ +
Sbjct: 123 NIDEIFAILLELLMQQ 138
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 61.7 bits (143), Expect(2) = 5e-15
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Frame = +2
Query: 296 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH----ANEDVEKMILGNKCDMEEKRVV- 460
YY+ A+G +V+D+T TF + KW ++D + E + ++L NKCD ++ +V
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 461 -SKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
S + E A + I + ETSAK ++N++ A L IL
Sbjct: 770 NSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKIL 809
Score = 36.7 bits (81), Expect(2) = 5e-15
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID 199
+ LFK+L+IGD GVGKT ++ R+ F+ + +T+ +
Sbjct: 669 EYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/70 (42%), Positives = 50/70 (71%)
Frame = +2
Query: 266 QERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME 445
QER+ IT++YYRGAMG +LVYDI +F ++ KW+ + +HA++D+ +++GNK D++
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 446 EKRVVSKERG 475
R++ RG
Sbjct: 62 HLRMIENRRG 71
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 13/156 (8%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
KL+++GD GVGK+ L + N F +I T+ D + L GK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQED 65
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDM--- 442
+ + Y ++ +DI + +F++I KWL ++ H E K+++GNK D+
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPE-TPKILVGNKRDLRSA 124
Query: 443 ---------EEKRVVSKERGEAIAREHGIRFMETSA 523
+ ++ E G+A+A+ G++++E S+
Sbjct: 125 QQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSS 160
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 75.8 bits (178), Expect = 3e-14
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
+K++++G GVGK+ + +F F + TI DF + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DF----------------YHTAGTE 46
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE-HANEDVEKMILGNKCDMEE 448
+F ++ Y + G +LVY + N +TF D+ I +E+V +++GNK D+ +
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 106
Query: 449 KRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSEL 562
+R VS + +A G F ETSAK N+D+ F+E+
Sbjct: 107 EREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEV 144
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 75.4 bits (177), Expect = 3e-14
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 3/164 (1%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
+ L+L+G +GVGK+ +L RF F + T+ + + + + L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSAT-IDEDPATLHITDTAS-- 184
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFD---DIVKWLRNIDEHANEDVEKMILGNKCDM 442
T Y G ++VY I +TF+ +VK +R I + ++ GNKCD+
Sbjct: 185 ---TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDL 241
Query: 443 EEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
+ R VS++ A EH F ETSA NIN F + I
Sbjct: 242 KHCRAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQI 285
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
YD LFK++LIGDSGVGK+ +L RF+ N F STIG++F +++++ GK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 74.5 bits (175), Expect = 6e-14
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
+K++++G GVGK+ + +F F + TI DF K +E+ L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI-DEHANEDVEKMILGNKCDMEE 448
+F ++ Y + G +LVY + N +TF D+ I +E+V +++GNK D+ +
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 122
Query: 449 KRVVS 463
+R VS
Sbjct: 123 EREVS 127
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +2
Query: 80 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
YD LFK++LIGDSGVGK+ +L R++ N F +TIG++ + VE+ GK ++ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 260 A 262
A
Sbjct: 75 A 75
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/176 (23%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDMEE- 448
+ + Y ++ + + + +F+++ KW+ I H + +++G + D+ +
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQVDLRDD 122
Query: 449 -----------KRVVSKERGEAIARE-HGIRFMETSAKANINIDRAFSELAEAILD 580
++ ++ E E +ARE ++++E SA + F E A L+
Sbjct: 123 QGTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDEAILAALE 178
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 69.3 bits (162), Expect = 2e-12
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
KL ++GD VGKT + + N F T +I T + + G K + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDMEEK 451
F + Y ++ +DI + +F+++ ++WL +D H + V ++++GNK D+ K
Sbjct: 68 FDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELD-HFSPGVPRVLVGNKKDLRPK 126
Query: 452 R---------VVSKERGEAIAREHGIRFMETSAKANINI 541
+ VS E G+ A+ ++++E SA N N+
Sbjct: 127 QDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENV 165
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 262
D K++ +GD VGKT L+ + ++F T FI++I D KT+E+ GK+ + + DT
Sbjct: 7 DPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTP 65
Query: 263 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHANEDVEKMILGNKCD 439
G +++ A +L +DI N ++F +I WL +++ + DV K+++GNK +
Sbjct: 66 GTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-DVPKVLVGNKME 124
Query: 440 MEEKRVVSKERGE 478
+ + S + G+
Sbjct: 125 LRCSQQESTDLGQ 137
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +2
Query: 404 DVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDK 583
+ + +++GNKCDMEE+RVVS +RG+ +A + G+ F ETSAK N N+ + F L + I DK
Sbjct: 12 NAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERLVDIICDK 71
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K++L GD+ VGKT L + N T T ++++ +E+ +K L +WDT G
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELG-LEVGSQKFLLDLWDTEGTTE 64
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEKMILGNKCDMEEK 451
+ + Y+G+ I+L +DI+N +TF+ I KWL + + ++++GNK D+ +
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSI-RVLIGNKNDIRKT 123
Query: 452 RVVSKERGEAI 484
R RG+ +
Sbjct: 124 RQDKDRRGKVL 134
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +2
Query: 245 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN-EKTFD-DIVKWLRNIDEHANEDVEKM 418
++ AG++R H + I L +T ++FD KWL N E + + +
Sbjct: 187 EVLHVAGEKRLHRCVSRICDTGY-IPLPRSLTRYARSFDCGERKWLTNGAEISWKMPGRY 245
Query: 419 ILGNKC-DMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRA 550
+ G + D ++ +V+ + + +A+++ + +METSA + I A
Sbjct: 246 LTGKEIQDAKKDSIVTAKEAKLLAKKYDLPYMETSALSRHAIQEA 290
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELR-----GKKIKLQIWDT 259
++ ++GDSGVGKT ++ ++ TIG ++K + + GK L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 385
G + +Y G G++LV+D+TN K+F ++ KWL +
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEV 109
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +2
Query: 98 LLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERF 277
++L+GDS GKT +L + N F + +T+ + VE+ G++I+L +WDT+G E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
Query: 278 HTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNI-DEHANEDVEKMILGNKCDM-EE 448
+ Y +++ +DI+ KT D I+ KW+ + D N+ V +++G K D+ E
Sbjct: 294 DHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPV--LLVGCKQDLRSE 351
Query: 449 KRVVSK 466
+VSK
Sbjct: 352 VNIVSK 357
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 296 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERG 475
YYRGA+G +LVYDI T++++ +WL+ + +HA+ ++ M++GNK D+ R V +
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 476 EAIAREHGI 502
+A A + I
Sbjct: 62 KAFAEIYHI 70
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = +2
Query: 350 TFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKA 529
+F KW+ ++ DV M++GNK D+ +KR V+ E GE A+E + F+ETSAKA
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 530 NINIDRAFSELAEAI 574
N+ + F +A A+
Sbjct: 73 GYNVKQLFRRVAAAL 87
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +2
Query: 284 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVS 463
++T+ R GI+LVYDIT K+FD++ WL +I ++ + E +++GNKCD+ + R V
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVP 107
Query: 464 KERGEAIAREHGIRFMETSAKAN 532
K +GE EH +R +TS +A+
Sbjct: 108 KRKGE----EH-VRNEDTSDQAD 125
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID-FKIKTVELRGKKIKLQIWDT 259
D ++K+ L G GVGKT I R S + F S ID I V + KK+K+ +WDT
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDT 65
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKC 436
G E + ++T ++Y + +++VY + + + + ++ N K++L NK
Sbjct: 66 LGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQS--AQVNAPAAKIVLVANKM 123
Query: 437 DMEEKR 454
D+ R
Sbjct: 124 DLPNYR 129
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
++L++G GKT IL++ TT I TIG F ++TVE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWL-RNIDEHANEDVEKMILGNKCDM 442
+ Y++ G++ V D + + + + L R ++E D ++ NK D+
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDL 130
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
++L++G GKT IL++ TT I TIG F +++VE K I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVESVEY--KNISFTVWDVGGQDK 73
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWL-RNIDEHANEDVEKMILGNKCDMEEK 451
+ Y++ G++ V D + + ++ + L + + E +D +++ NK D+
Sbjct: 74 IRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNA 133
Query: 452 RVVSK 466
VS+
Sbjct: 134 LSVSE 138
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Frame = +2
Query: 56 ICKMAKKTYDLL------FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTV 217
I K K ++D+L F+++++G GVGKT ++ RF F+ + T+G D K+V
Sbjct: 90 ISKKYKDSWDVLTLPAAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSV 148
Query: 218 EL-RGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH 394
L + L+I DTAG F + + A +LVY + + + + ++ R I
Sbjct: 149 TLSKDFNAFLEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYI 208
Query: 395 ANEDVEKMILGNKCDMEEKRVVSKERGE 478
+ V +++GNK D+ + + R +
Sbjct: 209 KGKTVPMVLVGNKTDLVSEELRQSTRAQ 236
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 LIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHT 283
+IG GKT IL+R +T + T+G F ++TV K I +WD GQ++
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLG--FNVETVTY--KNISFTVWDIGGQDKIRA 55
Query: 284 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN-IDEHANEDVEKMILGNKCDMEEKRVV 460
+ YY+G GI+ V D + + ++ L + E + V +++ NK DM
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTA 115
Query: 461 SKER 472
S+ R
Sbjct: 116 SEIR 119
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 57.2 bits (132), Expect = 9e-09
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 262
D ++++ L+GD GVGKT +L RF + F + TI ++ K++ + + L+I DTA
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYR-KSINIDDVTVTLEILDTA 61
Query: 263 GQ-ERFHTITTSYYRGAMGIMLVYDITNEKTF------DDIVKWLRN------------- 382
+ + + + R G ++VY + TF D++K R+
Sbjct: 62 SRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSNRTRDTRP 121
Query: 383 -----IDEHANEDVEK-----MILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKAN 532
++E ++ + K +++GNK D+ +R V+++ G+ +A +G F E SA
Sbjct: 122 DSCPGLNEQTHDGLSKDAISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEASALEY 181
Query: 533 INIDRAFSELAEAILDK 583
D ++L ++ K
Sbjct: 182 EAADACIADLVRDMMAK 198
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K +++GD GVGKT +L + + F +++ T D TVE+ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQED 78
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDE------------HAN-EDVE 412
F + Y A ++ + + + +F ++ KW+ I E H++ +D
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKDCY 138
Query: 413 KMILGNKCDMEEKRVVSKERGEAIARE-HGIRFMETSAKANINIDRAFSE 559
K++ + ++ + +S ++ E + ++ + ++ETS+ N+ F E
Sbjct: 139 KIL--TELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDE 186
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
+++++G GKT IL++ +T I TIG F ++T++ K + L IWD GQ++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIG--FNVETLQPT-KNVTLTIWDVGGQDK 76
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI-DEHANEDVEKMILGNKCDM 442
+ Y++G G++ V D ++ + + L + D DV +++ NK D+
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDL 133
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 296 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDE-HANEDVEKMILGNKCDMEEKRVVSKER 472
Y R G +++Y IT+ +F+ ++ I+ +D+ +++GNK D+E KR V+ +
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 473 GEAIAREHGIRFMETSAKANINIDRAFSELAEAILDK 583
G+ +A F ETSA +D AF L I K
Sbjct: 65 GQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKK 101
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/67 (34%), Positives = 43/67 (64%)
Frame = +2
Query: 383 IDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSEL 562
+ + ++ + +++GNKC ++ +R VS G +A+E G+ F ETSA+ NIN+ F L
Sbjct: 1 MQHNCEQEAKAVLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEAL 60
Query: 563 AEAILDK 583
++IL++
Sbjct: 61 VDSILEE 67
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/50 (46%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +2
Query: 416 MILGNKCDMEEKRVVSKERGEAIAREH-GIRFMETSAKANINIDRAFSEL 562
+++GNKCD+E++RVV K++G+ +A++ F+ETSAKA IN++ F +L
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 54.8 bits (126), Expect = 5e-08
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCIL--FRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 268
K+L+ GDS VGK+ ++ F+ H+ + T+G + +K V +
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIP-------------- 52
Query: 269 ERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED--VEKMILGNKCDM 442
T S + +++ YD++NE++F+ KWL A D + ++ K D+
Sbjct: 53 ----ETTDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDL 108
Query: 443 EEKRVVSKERGEAIAREHGIRFMETSA 523
+++RV+S ++G+ A + + E SA
Sbjct: 109 KQRRVISTKQGKDYANSKNLEYFECSA 135
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 54.4 bits (125), Expect = 7e-08
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Frame = +2
Query: 62 KMAKKTYDLLFKLLLIGD-SGVGKTC-ILFRFSDNHFTTTFIS-TIGIDFKIKTVELR-- 226
K+ + D FK++ +GD +G GK L + N + + TIG+DF + +E R
Sbjct: 41 KLKSRASDHTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRET 100
Query: 227 GKK----IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEH 394
KK +KLQ WD A ERF +T Y R G ++ + + +KW + E
Sbjct: 101 DKKKDSTVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKE- 159
Query: 395 ANEDVEKMIL 424
AN M+L
Sbjct: 160 ANSGSVPMVL 169
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K+ ++G VGK+ + +F + F ++ TI F K ++ +G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 275 FHTITTSYYRGAMGIMLVYDITNEK 349
+ SY G G +LVY +T+ K
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 52.8 bits (121), Expect = 2e-07
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
F ++ G S VGKT ++ RF F + TI DF IK V + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM--- 442
F + +LVY + ++F + ++ I E +++ NK D+
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLA 147
Query: 443 EEKRVVSKERGEAIAREHGIR------FMETSAKANINIDRAFSELAE 568
V++ RG I+ +H ++ +++ SAK N ++ F L +
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMD 195
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
+LL++G GKT IL+ + T I TIG F ++ VE K IK +WD GQ++
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDEPVNT-IPTIG--FNVEVVEY--KNIKFTVWDIGGQDK 146
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWL-RNIDEHANEDVEKMILGNKCDMEE 448
+ Y++ G++ V D + + + L + + E + ++L NK D+ +
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPD 205
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +2
Query: 284 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-----EDVEKMILGNKCDMEE 448
+ +Y+ G +LVYD+T+ ++F+ + WL I + V ++ NK D
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SR 64
Query: 449 KRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
KR+V + G A H + ETSA+ I F L ++
Sbjct: 65 KRLVEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVV 107
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Frame = +2
Query: 209 KTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNID 388
K + + ++L I DTAG SY G ++VY IT+ +++ + ++ +
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVT 60
Query: 389 EHANED----VEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFS 556
+ D + +++GNK D+ R V+K+ A E+G ETSA N N+ F
Sbjct: 61 QVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFY 120
Query: 557 ELA 565
+A
Sbjct: 121 NMA 123
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 49.2 bits (112), Expect = 2e-06
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRF--SDNHF--TTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
+K++L+GD+GVGK+ ++ R + H+ + + T G T L + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHASYFTA---SNSCHLYLLDT 70
Query: 260 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN-IDEHANED--VEKMILGN 430
+G E + +T Y + ++ + + + + + KW + +D + V K +LG
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGC 130
Query: 431 KCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
K D + + + + + E A G TSA N++ F +A+ +
Sbjct: 131 KIDTQHEADI-QPKAEDFASRIGAELSITSAITGTNVNDFFERIADKL 177
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
+L L+G GKT + + F+ I T+G F ++ V +G + +++WD GQ R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVS-KG-NVTIKVWDIGGQPR 77
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-EDVEKMILGNKCD---- 439
F ++ Y RG I+ + D + + L N+ E + ++LGNK D
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLPNS 137
Query: 440 MEEKRVVSK 466
++EK +V +
Sbjct: 138 LDEKELVER 146
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +2
Query: 116 SGVG-KTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQERFHTITT 292
SG G KT IL++ T + T+ F ++T+ K I +WD GQ++ +
Sbjct: 117 SGRGRKTTILYKLKLKETVNT-VPTVA--FNVETIS-PCKNITFSVWDIGGQDKIRRLWR 172
Query: 293 SYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-EDVEKMILGNKCDM 442
Y++GA GI+ V D +++ ++ + L + +H+ V +++ NK D+
Sbjct: 173 HYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDL 223
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/91 (26%), Positives = 50/91 (54%)
Frame = +2
Query: 89 LFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 268
+ K+++IG+ GVGK+ + RF F + T+ ++ + E+ G+ + +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYR-QDAEVAGEVVAIELTDTAGE 919
Query: 269 ERFHTITTSYYRGAMGIMLVYDITNEKTFDD 361
+ G + ++L Y IT+ +FD+
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFDE 949
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 419 ILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
+LGNK D+E+ RVV + A+A G+++ ETSA N+ ++ L + ++
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVM 54
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 44.0 bits (99), Expect = 9e-05
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTT-----FISTIGIDFKIKTVELRGKKIKL----- 244
KL+L+GD+G+GK+ ++ + + H T+ F T + K L+ +
Sbjct: 7 KLVLVGDAGIGKSTLIAKCHETHPTSAECGGFFAKTFDRSAEYKPTALKAYSTNVYSNPT 66
Query: 245 ---------QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEH 394
I DT G + Y A +L +D+TN +F+++ KW I +
Sbjct: 67 GVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLY 126
Query: 395 ANEDVEKMILGNKCDMEEKRVVSKERGEAI---AREHGIRFMETSAKANINIDRAFSELA 565
+ V M++G K + EKR VSK E + +E+G F S N D A S+L
Sbjct: 127 -EKKVPLMLVGLKPNPVEKRKVSKADAERMLTRVKENGSYFEVDS--FNPKEDEA-SKLF 182
Query: 566 EAILDK 583
EA +++
Sbjct: 183 EAAVEQ 188
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/125 (26%), Positives = 51/125 (40%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
K+++ GD GKTC+ R F +I T I D G
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPTNEIQE-----------------DDDGNAV 269
Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 454
Y+G G++++ DIT TF + + L + H + ++L N+ DMEE R
Sbjct: 270 LDAGFVDVYKGTHGVLMLLDITKPWTFTYVRRELPKVPPH----IPVLVLANRRDMEEHR 325
Query: 455 VVSKE 469
+V E
Sbjct: 326 LVDAE 330
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 41.5 bits (93), Expect = 5e-04
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 262
+ +F+L ++G GVGK+ + R+ N FT ++ GK +++ DTA
Sbjct: 2596 ETMFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTA 2641
Query: 263 GQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRN--IDEHANED----VEKMIL 424
GQE + + S ++++ I + +++++ K LR I EH + + +I+
Sbjct: 2642 GQEEYTSFRDSSLATGDAFLVLFAINSASSWNEL-KDLRGKIIREHEESNTTCTIPMVIV 2700
Query: 425 GNK 433
GNK
Sbjct: 2701 GNK 2703
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 227 GKKIKLQIWDTAGQERFHTITTSYYR 304
G+ I+L +WDTAGQE F IT +YYR
Sbjct: 31 GEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
F ++++G GKT IL+R + T +T F ++T+ K I+ ++WD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYRNKFREYVNTVPTTA---FNVETIR-PFKGIRFKVWDIGGRE 77
Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN-EDVEKMILGNKCD 439
+ + +Y R ++ V D T+ ++ L N+ A +I NK D
Sbjct: 78 QNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQD 134
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRF-----SDNHFTTTFISTIGIDFKIKTVELRGKKIK--LQIW 253
KL ++GD+ VGKTCIL+R+ S T +I + ++ + W
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 254 DTAGQERFHTITTS-----YYRGAMGIMLVYDITNEKTFDDI-VKWLRNIDEHANEDVEK 415
DT R + S YR ++ +DITN +F ++ W+ + +H +
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPEL-KHYMPETPV 128
Query: 416 MILGNKCDM 442
+++GNK DM
Sbjct: 129 LVVGNKKDM 137
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Frame = +2
Query: 254 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNK 433
DTAG+E++ +++ Y RGA ++ YDIT E + + ++ + A + +I+G K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 434 CDM--EEKRVVSKERGEAIAR-EHGIR-----------FMETSAKANINIDRAFSELAEA 571
D+ ++ R +++ G +A+ ++ ++ F ETS+K +D F +
Sbjct: 338 KDLVTDDTREITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVFEFILST 397
Query: 572 IL 577
L
Sbjct: 398 CL 399
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/131 (21%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFR--FSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 268
+++++GDS VGKTC+L + + N + + +I ++ + + + GK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY-VANIIVDGKVYKLELCDV--- 75
Query: 269 ERFHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEHANEDVEKMILGNKCDME 445
+ T + + L + + + +F + KW + ++ + + +++G K D+
Sbjct: 76 DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEV-KNCSPNSPIIVVGTKTDLR 134
Query: 446 EKRVVSKERGE 478
E +K+RG+
Sbjct: 135 ENE--NKKRGK 143
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 200 FKIKTVELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWL- 376
F ++TVE K I +WD GQ++ + Y++ G++ V D + + + + L
Sbjct: 500 FNVETVEY--KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELS 557
Query: 377 RNIDEHANEDVEKMILGNK 433
R + E D ++ NK
Sbjct: 558 RMLAEDELRDAVLLVFANK 576
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 320 MLVYDITNEKTFDDIVKWL-RNIDEHANED-VEKMILGNKCDMEEKRVVSKERGEAIARE 493
+++Y I + +FD+ +W+ R + +H N D + +I+ K D++ R V E G + E
Sbjct: 131 LVLYSIVDRSSFDE-ARWIARYVKDHRNTDSMSMVIVATKKDLDHLRRVDIEEGLGFSNE 189
Query: 494 HGIRFMETSAKANIN-IDRAFSELAEAI 574
F E S N + EL + I
Sbjct: 190 LDCTFYEVSISEGYNEVQELLHELLKRI 217
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = +2
Query: 413 KMILGNKCDMEEKRVVSKER----GEAIAREHG------IRFMETSAKANINIDRAFSEL 562
K GNK D+EE+R VS E+ A ARE G +R +ETSAK + NI F E+
Sbjct: 78 KRASGNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNISDVFDEV 137
Query: 563 AEAILDKT 586
+ + D T
Sbjct: 138 VDMLEDCT 145
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +2
Query: 314 GIMLVYDI--TNEKTFDDIV-KWLRNIDEHANEDVEK-MILGNKCDMEEKRVVSKERGEA 481
G +++YD+ TN K +D K L + + + +I+ +KCD + ++ + A
Sbjct: 157 GFLVLYDVEATNAKRLEDTQEKVLSAVITYVQKSKRPFVIVASKCDDTQLSLLQEVYRFA 216
Query: 482 IAREHGIRFMETSAKANINIDRAFSELAEAI 574
++ + +ETS N+N+D AF LA+ I
Sbjct: 217 QTKKLNVPIVETSTYQNVNVDLAFVVLAQLI 247
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 35.9 bits (79), Expect = 0.025
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGI-----DFKIKTVELR--------GKK 235
KL+++G G GKT +L + +ST+GI +I T L G
Sbjct: 668 KLMVVGIQGYGKTTLLAALKGQPLPSN-LSTVGIVVDEWSVQISTSLLSRIGITSGIGPT 726
Query: 236 IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT-NEKTFDDIVKWLRNIDEHANEDVE 412
I L WD AGQ ++ + + + V++ T E+ +++ WL NI A +
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPYS-D 785
Query: 413 KMILGNKCD 439
+I+G D
Sbjct: 786 VIIIGTHLD 794
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFS-DN-HFTTTFISTIGI-DFKIKTVELRGKKIKLQIWDTAG 265
KL+L+G GKT ++ R DN +F + + I + +F++K + ++ +IWD G
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKK-DFLHREFIFKIWDFGG 611
Query: 266 QERFHTITTSYYRGAMGIMLVYDI-TNEKTFDDIVKWLRNIDEHA 397
QE ++ + +LV+++ E+ + WL I A
Sbjct: 612 QEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARA 656
>SB_2974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 34.7 bits (76), Expect = 0.057
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Frame = +2
Query: 56 ICKMAKKTYDLLFKLLLIGD-SGVGKTCILFRFSDNHFTTTFISTIG----IDFKIKTVE 220
+C+M ++ LF L L+G+ +G T I FS +T S +DF +K+++
Sbjct: 15 LCRMVQRMIKKLF-LQLVGEFKRLGSTIIFASFSKIIISTKKRSVSDALAYVDFILKSIQ 73
Query: 221 LRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN 400
+ + I T+ E + + + G G + + TN +T DD L E+ N
Sbjct: 74 SKDLFHSIDITPTSCWEYLMWLDKANHGGVRGKLPSDEDTNGETEDDEDDVLPCTPENNN 133
Query: 401 EDVEKMILGNKCDMEEKRVVSKERGEAIAREH 496
ED C++ R + E + + H
Sbjct: 134 EDAPDRDELEHCEISPNRCLLSELFQIVIAGH 165
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 242 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMI 421
+ +WDT G E + ++T ++Y + +++VY + + + + ++ N K++
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQS--AQVNAPAAKIV 58
Query: 422 L-GNKCDMEEKR 454
L NK D+ R
Sbjct: 59 LVANKMDLPNYR 70
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 71 KKTYDLLFKLLLIGDSGVGKTCILFRF 151
+K D L K+LLIGDS VGKT +L F
Sbjct: 6 RKKQDYLLKVLLIGDSNVGKTKLLLTF 32
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 34.3 bits (75), Expect = 0.076
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 491 EHGIRFMETSAKANINIDRAFSELA 565
+H + FMETSAK +N+D AF +A
Sbjct: 149 DHNVAFMETSAKTGLNVDLAFMAIA 173
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 34.3 bits (75), Expect = 0.076
Identities = 26/141 (18%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Frame = +2
Query: 62 KMAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIK 241
K ++ + KL+L+G+SG GKT + ++ + I+ ++ ++
Sbjct: 251 KKSRPVHSKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLE 310
Query: 242 LQIWDTAGQERFHTITTSYY--RGAMGIMLV----YDITNEKTFDDIVKWLRNIDEHANE 403
+Q+ D AGQ R+ +T ++ A+ ++++ Y T E + W++ + +
Sbjct: 311 VQVVDCAGQRRYQ-LTHPFFLSEEALHLLVINLHSYKKTPESFERNAGDWIKWVTSRLEK 369
Query: 404 DVEKMILGNKCDMEEKRVVSK 466
++L ++ + E + K
Sbjct: 370 PRIMVVLTHRDECREDEITDK 390
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 34.3 bits (75), Expect = 0.076
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 56 ICKMAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKK 235
+ + K D ++LL+G GKT IL + T G F IK+V+ +G
Sbjct: 6 LLRKLKSEKDREMRILLLGLDNSGKTTILKSLASED-VLHITPTQG--FNIKSVQSKG-G 61
Query: 236 IKLQIWDTAGQERFHTITTSYY 301
+L +WD GQ + +Y+
Sbjct: 62 FRLNVWDIGGQRKIRPYWKNYF 83
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/66 (24%), Positives = 34/66 (51%)
Frame = +2
Query: 386 DEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELA 565
D NE ++ + D+ +RV+S + G+ AR +++ ETS+ + F++L
Sbjct: 22 DPDYNEIRSELYGQTQIDLISRRVISSKEGQKWARAQDLKYYETSSANGQGVYEMFNDLL 81
Query: 566 EAILDK 583
++D+
Sbjct: 82 VTVIDR 87
>SB_28072| Best HMM Match : VWA (HMM E-Value=0)
Length = 2979
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -1
Query: 576 SIASASSEKALSIFMFALADVSMKRMPCSRAIASPRSLLTTR-FSSISHLLPSII 415
+I A EK +++F A+ D S R S + SP+ L+T F +I H PS++
Sbjct: 327 AILRALQEKGINLFFIAVGDTSDSRGLAS-FVKSPKHLITGESFETIGHRAPSVV 380
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 83 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG 193
++LFK+L++GD+ VGKT + R+ + + TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Frame = +2
Query: 62 KMAKKTYDLLFKLLLIGDSGVGKTCI---LF---RFSDNHFTTT---FISTIGIDFKIKT 214
K KK ++ F L+++G+SG+GK+ + LF +SD + T+ I+
Sbjct: 17 KSVKKGFE--FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVE 74
Query: 215 VELRGKKIKLQIWDTAG 265
+E RG K++L + DT G
Sbjct: 75 IEERGVKLRLTVVDTPG 91
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 284 ITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNI 385
+ +Y+ G +LVYD+T+ ++F+ + WL I
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEI 34
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 31.1 bits (67), Expect = 0.70
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Frame = +2
Query: 14 GYFGSLISVL*NE*ICKMAKKTYDLLFKLLLIGDSGVGKTCIL-FRFSDNHFTTTFISTI 190
GY G + L N+ K KK ++ F ++++G+SG+GK+ +L F + +T + +I
Sbjct: 3 GYVG--FANLPNQVFRKSVKKGFE--FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSI 58
Query: 191 ------GIDFKIKTVELR--GKKIKLQIWDTAG 265
++ K TVEL+ G +++L + DT G
Sbjct: 59 KEKLNKTVEVKPCTVELKEGGVRLRLTVVDTPG 91
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 401 EDVEKMILGNK-CDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAIL 577
++ EK + G K CD E+K V + E+ + RE+ E I++ + SE+AE
Sbjct: 202 DNAEKTVHGEKMCDFEQKLVNADEKIRVLTRENE-DINEKITALRIDLTKKESEIAEMAH 260
Query: 578 DK 583
DK
Sbjct: 261 DK 262
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG 193
+ ++++G +GVGKT ++ RF F + T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -1
Query: 294 DVVMVWKRSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLNNMHVFPTPE 115
D++M WK S + +F ++ V + S+ IV V+ + EN+ + + TP+
Sbjct: 22 DLLMGWKADGENFSEGFK-VFSVIHKLVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPK 80
Query: 114 SPMRSSLNNKSYV 76
S ++ + ++YV
Sbjct: 81 SNPKTGMTKQAYV 93
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 92 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 259
FK+ ++G S VGKT ++ FT I TI D+ I + G + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 191 GIDFKIKTVELRGKKIKLQIWDTAGQERFHTITTSYY 301
G F ++TVE R +K IWD G ++ + YY
Sbjct: 220 GAGFNVETVEHRS--LKFTIWDVGGLQKLRPLWRHYY 254
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/82 (24%), Positives = 40/82 (48%)
Frame = +2
Query: 257 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKC 436
T+ + F + T S ++++ D + T DI+K +++ + V + +GN+
Sbjct: 1779 TSAAKLFKSQTPSEPSTKKALVILIDKKSGTTPADIIKAATPLEQDKVK-VVAVAIGNEA 1837
Query: 437 DMEEKRVVSKERGEAIAREHGI 502
D+ E VS E+G I + G+
Sbjct: 1838 DVSELGNVSPEKGSTIKGDKGV 1859
>SB_23772| Best HMM Match : Remorin_C (HMM E-Value=1.9)
Length = 158
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 EKTFDDIVKWLRNIDEHANEDVEKMILGNKCDME-EKRVVSKERGEAIAREHGIRFMETS 520
+K D ++ +N+D+++N D ++ ++ ++RVV+K R + IARE R T
Sbjct: 27 DKNGDSDNEYNKNVDDYSNGDDNYERSTSQVTIDAQQRVVAKYRRQKIARE---REQNTY 83
Query: 521 AKANINIDRAFSELAEAI 574
+A +++A + +++
Sbjct: 84 LRAEQEVEKALQKKRDSL 101
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -1
Query: 273 RSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVV 166
R A+ H S I+LP +S FI+ I IV I +V+
Sbjct: 758 RPATAMLHDESIIYLPSSSPYFIITMIIIVSIVIVI 793
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 227 GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT-NEKTFDDIVKWLRNI 385
G I L WD AGQ ++ + + + V++ T E+ +++ WL NI
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNI 56
>SB_47097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 366 TISSNVFSF-VMSYTSMMPIA-PR*YDVVMVWKRSCPAVSHIWSF 238
T++S F+ +S ++ I P Y VM KR C A++ IW F
Sbjct: 127 TVASTTFNLCAVSIDRLVAIVRPLIYQQVMTEKRCCVAITFIWCF 171
>SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 158 NHFTTTFISTIGIDFKIKTVELRGKKI-KLQIWDTAGQERFHTITTSYYRGAMGIMLVYD 334
N+F +TF + + + K + GK I + +W+ A + T Y+RGAMG + +Y+
Sbjct: 104 NYFRSTFGVHLWLVVQEKP-RVFGKVITRYWVWENAVTTKAVTHDGRYFRGAMGCLQIYN 162
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/52 (23%), Positives = 28/52 (53%)
Frame = -1
Query: 417 IFSTSSFACSSIFRNHLTISSNVFSFVMSYTSMMPIAPR*YDVVMVWKRSCP 262
++++S F C S+F + + + +F MS + + +A R +++ + CP
Sbjct: 85 LYASSVFTCVSLFNSVRNVMTLLFPVAMSSLNDLRVALRRIQALLLLEELCP 136
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 296 YYRGAMGIMLVYDITNEKTFDDI 364
Y + G +LVY IT + TF+D+
Sbjct: 5 YMKNGQGFVLVYSITAQSTFNDL 27
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 95 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIG-IDFKIKTV 217
+++++G GVGK+ + R F + ST+G + F I T+
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTM 59
>SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -1
Query: 252 HIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSENLN 142
+IW F+ +PL+ ++F S+ +V + VV ++L+
Sbjct: 88 YIWPFMSVPLSVSIFTTSSMAVVRSRSVVYAWKQSLS 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,839,939
Number of Sequences: 59808
Number of extensions: 449619
Number of successful extensions: 1492
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1442
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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