Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d02
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           130   2e-32
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    73   7e-15
AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    25   2.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  130 bits (315), Expect = 2e-32
 Identities = 61/161 (37%), Positives = 96/161 (59%)
 Frame = +2

Query: 92  FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 271
           FKL+L+G+S VGK+ ++ RF    F     STIG  F  +T+ +    +K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84

Query: 272 RFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEK 451
           R+H++   YYRGA   ++VYDI N  +F     W++ +   A+ ++   + GNK D+   
Sbjct: 85  RYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANS 144

Query: 452 RVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAI 574
           RVV  E  +  A ++ + FMETSAK  +N++  F  +A+ +
Sbjct: 145 RVVDYEEAKQYADDNRLLFMETSAKTAVNVNDIFLAIAKKL 185


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 72.9 bits (171), Expect = 7e-15
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
 Frame = +2

Query: 95  KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQER 274
           K +++GD  VGKTC+L  ++ + F   ++ T   ++    V + G ++ L +WDTAGQE 
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQED 66

Query: 275 FHTITTSYYRGAMGIMLVYDITNEKTFDDIV-KWLRNIDEHANEDVEKMILGNKCDMEEK 451
           +  +    Y      ++ Y + +  +F+++  KW   I  H   D   +++G K D+ E 
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHC-PDAPIILVGTKIDLRED 125

Query: 452 R------------VVSKERGEAIARE-HGIRFMETSAKANINIDRAFSELAEAILDK 583
           R             + +E+G+ +A +   +++ME SA     + + F E   A  +K
Sbjct: 126 RETISLLADQGLSALKREQGQKLANKIRAVKYMECSALTQRGLKQVFDEALCATEEK 182


>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 322 HDAHSAAVIRRRDGVETLLPSSVPYL 245
           H  +  AV+R    ++TL+PS +P++
Sbjct: 5   HLPYCEAVVREALRIDTLVPSGIPHV 30


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 433  FIAKYHLFHILVCMLVYIS*PFNDIIKCFFI 341
            FI  ++LF  +V +L  +    +DII+ +F+
Sbjct: 1682 FIEPWNLFDFVVVILSILGLVLSDIIEKYFV 1712


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 473 RAPC*QHVSPPYHIYCQVSSFPHPRLHARL 384
           +  C Q +      +C + +F HPR H ++
Sbjct: 39  KTTCSQCIQTTNCRWCTMPNFTHPRCHGQI 68


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +3

Query: 66  WPKKHTTCYSNCFSSVTP 119
           W  KH  C+++C     P
Sbjct: 744 WELKHADCFNHCLEVYRP 761


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 235 NKAPDMGHCWAGAFPHHH 288
           + +P  GH  A   PHHH
Sbjct: 705 SSSPTGGHHLASPSPHHH 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,640
Number of Sequences: 2352
Number of extensions: 14043
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)