Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d01
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   3.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.1  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 116 TGGFWQ*IQTEPFTAEPLNRTTPTPHS 196
           T  F+Q  +T PF A   ++   T H+
Sbjct: 12  TNSFYQNYKTNPFLASDCDKNQNTEHN 38


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 460 YTLNLPSLRPFEICSF 413
           YT+NL SL   EIC F
Sbjct: 285 YTVNLGSLGYNEICEF 300


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +2

Query: 137 IQTEPFTAEPLNRTTPTPHSSALPLTEIASSF 232
           I  E F A+PLN        +   +TE+   F
Sbjct: 60  INAETFKAQPLNELFDVTRDNYRHITELKRRF 91


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 427 EICSFRGVP 401
           E CSF+GVP
Sbjct: 23  EFCSFQGVP 31


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 427 EICSFRGVP 401
           E CSF+GVP
Sbjct: 25  EFCSFQGVP 33


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 427 EICSFRGVP 401
           E CSF+GVP
Sbjct: 23  EFCSFQGVP 31


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 427 EICSFRGVP 401
           E CSF+GVP
Sbjct: 25  EFCSFQGVP 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,053
Number of Sequences: 336
Number of extensions: 3000
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)