Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d01
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   3.3  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    24   3.3  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   5.8  

>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 384 HTSTCDRTFYNTYC 343
           +  +CD+TFY+T C
Sbjct: 131 YKDSCDKTFYSTKC 144


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 384 HTSTCDRTFYNTYC 343
           +  +CD+TFY+T C
Sbjct: 129 YKDSCDKTFYSTKC 142


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 288 SVQLATPVYAQVHTRNGVLNDDAISV 211
           +V+LAT V  ++  R  +LND  + +
Sbjct: 223 AVELATVVNPELENRENLLNDQVVQL 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,743
Number of Sequences: 2352
Number of extensions: 12573
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)