Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2d01
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog pr...    71   2e-12
BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p pro...    71   2e-12
AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA...    71   2e-12
AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p pro...    29   6.5  
AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA ...    29   6.5  
AY061240-1|AAL28788.1|  721|Drosophila melanogaster LD18233p pro...    28   8.6  
AE014297-687|AAF54179.1|  721|Drosophila melanogaster CG2702-PA ...    28   8.6  

>U82273-1|AAC47427.1|  770|Drosophila melanogaster FGF homolog
           protein.
          Length = 770

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 73  THITGTSIPGRLFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCV 252
           +H+  TS   +L+I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+
Sbjct: 242 SHLAWTSRKIQLYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCL 300

Query: 253 YLCIDRCGQLYGSKTLSDDCFMREIM 330
           YLC+D CG  YGSK  +DDC   E M
Sbjct: 301 YLCMDACGVPYGSKDFTDDCVFNENM 326



 Score = 35.5 bits (78), Expect = 0.057
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 369 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 461
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>BT003790-1|AAO41473.1|  760|Drosophila melanogaster GH08887p
           protein.
          Length = 760

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 73  THITGTSIPGRLFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCV 252
           +H+  TS   +L+I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+
Sbjct: 242 SHLAWTSRKIQLYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCL 300

Query: 253 YLCIDRCGQLYGSKTLSDDCFMREIM 330
           YLC+D CG  YGSK  +DDC   E M
Sbjct: 301 YLCMDACGVPYGSKDFTDDCVFNENM 326



 Score = 35.5 bits (78), Expect = 0.057
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 369 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 461
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>AE014297-2709|AAF55701.1|  770|Drosophila melanogaster CG4608-PA
           protein.
          Length = 770

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 73  THITGTSIPGRLFINRRFLAVNPNGTVYGGTIESDNADTTFKRLAVDRNRIVIQNAITCV 252
           +H+  TS   +L+I  R L +  +G V  GT + ++  T  +R  VD  RI +Q+  TC+
Sbjct: 242 SHLAWTSRKIQLYIKNRILQILRDGVV-NGTQDENSEFTILQRSTVDVGRIKLQSVATCL 300

Query: 253 YLCIDRCGQLYGSKTLSDDCFMREIM 330
           YLC+D CG  YGSK  +DDC   E M
Sbjct: 301 YLCMDACGVPYGSKDFTDDCVFNENM 326



 Score = 35.5 bits (78), Expect = 0.057
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 369 RKLTYVALKNDGTPRKLQISKGRKLGKFSVY 461
           R++ Y+AL   G PR+ QI   R LGK S Y
Sbjct: 343 RRVFYLALNGSGQPRRTQIPASRSLGKLSTY 373


>AY075499-1|AAL68309.1|  667|Drosophila melanogaster RE51073p
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 222 HRHSKRHYVCVPVHRPVWPTV 284
           HRHS RHY+     RPV PTV
Sbjct: 507 HRHSPRHYIA--DQRPVGPTV 525


>AE014134-110|AAF51492.1|  667|Drosophila melanogaster CG4133-PA
           protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 222 HRHSKRHYVCVPVHRPVWPTV 284
           HRHS RHY+     RPV PTV
Sbjct: 507 HRHSPRHYIA--DQRPVGPTV 525


>AY061240-1|AAL28788.1|  721|Drosophila melanogaster LD18233p
           protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 19  RLLALVT---LASMADCSALLTHITGTSIPGRLFINRRFLAVNPNGTV 153
           RL++ VT    +   +C+  L + T TS   R  + ++FL  NPN  V
Sbjct: 401 RLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKV 448


>AE014297-687|AAF54179.1|  721|Drosophila melanogaster CG2702-PA
           protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +1

Query: 19  RLLALVT---LASMADCSALLTHITGTSIPGRLFINRRFLAVNPNGTV 153
           RL++ VT    +   +C+  L + T TS   R  + ++FL  NPN  V
Sbjct: 401 RLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKV 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,730,853
Number of Sequences: 53049
Number of extensions: 524283
Number of successful extensions: 1462
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)