Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2c17
(250 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 175 2e-43
UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californ... 81 6e-15
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 55 3e-07
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 51 4e-06
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 49 2e-05
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 48 4e-05
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 40 0.014
UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF... 32 2.1
UniRef50_A4MJY9 Cluster: Nuclease (RecB family)-like protein; n=... 32 2.8
UniRef50_Q0ZCD7 Cluster: RNA-directed DNA polymerase; n=1; Popul... 32 2.8
UniRef50_Q600Q5 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_Q4HJ49 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_A1ZZ64 Cluster: Glycosyl transferase, group 2 family pr... 31 6.5
UniRef50_A2EAQ1 Cluster: EF hand family protein; n=1; Trichomona... 31 6.5
UniRef50_A0C307 Cluster: Chromosome undetermined scaffold_146, w... 31 6.5
UniRef50_Q64XP9 Cluster: Dipeptidyl peptidase IV; n=10; Bacteroi... 30 8.5
UniRef50_A4C162 Cluster: Rhodanese-related sulfurtransferase; n=... 30 8.5
UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1... 30 8.5
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 175 bits (425), Expect = 2e-43
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 63
LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP
Sbjct: 22 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 81
Query: 62 KDTNALVPLVWRESKEIKLP 3
KDTNALVPLVWRESKEIKLP
Sbjct: 82 KDTNALVPLVWRESKEIKLP 101
>UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 64
Score = 80.6 bits (190), Expect = 6e-15
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 3 RQFDFFALSPHQRHQRVGIFRPINKFFVFGISLFHA 110
RQFDFFA SPHQRHQRVGIFRPINKFFVFGISLFHA
Sbjct: 29 RQFDFFAFSPHQRHQRVGIFRPINKFFVFGISLFHA 64
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 55.2 bits (127), Expect = 3e-07
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI-ISSVKKTNSKHKKFVYW 66
LLY +LN+YI N+ L ++Y D D N RTR+ + S N I I S KT ++FVY
Sbjct: 33 LLYILLNAYISNNFVLHEKYTDFVDVNDVRTRLSVDSNTNKIKIVSTLKTPQSLRRFVY- 91
Query: 65 PKDTNALVPLVWRESKE 15
+ N LVPLV R + E
Sbjct: 92 -INGNGLVPLVDRTAVE 107
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 51.2 bits (117), Expect = 4e-06
Identities = 34/76 (44%), Positives = 41/76 (53%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 63
LLYKIL +YI ++L Q+Y D DEN RTRI I SV K +KFV+
Sbjct: 20 LLYKILTTYISKKFTLTQEYIDCVDENNVRTRIVADQ-----IKSVFKIPQSLQKFVH-- 72
Query: 62 KDTNALVPLVWRESKE 15
D +VPLV R S E
Sbjct: 73 VDKTIVVPLVKRVSIE 88
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/76 (42%), Positives = 38/76 (50%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 63
LLY I NSYIV + QY DL D N RTR + SV K N K+F ++
Sbjct: 17 LLYIIFNSYIVKHMDYRTQYCDLIDCNDVRTRFE-----RGTVQSVHKKNVFMKRFAHYV 71
Query: 62 KDTNALVPLVWRESKE 15
DT +V LV R S E
Sbjct: 72 NDTATIVGLVDRHSIE 87
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 48.0 bits (109), Expect = 4e-05
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 63
LL+ IL SYI N+ L+ +YF+ +EN R+R+ +S++K+T S +KFVY
Sbjct: 37 LLFIILESYISKNFVLSCEYFECVNENDVRSRL----TGGRFVSTIKQTESL-RKFVY-- 89
Query: 62 KDTNALVPLVWRESKE 15
N L+PLV R S E
Sbjct: 90 VHENGLMPLVDRVSSE 105
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 39.5 bits (88), Expect = 0.014
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQS-----------ACNNIISSVKKT 96
LLY I ++YI + Q+Y D+ D +G R+RI +Q N I VKK+
Sbjct: 18 LLYIIFDTYISEKFQFKQEYRDVTDNDGVRSRILVQDDGGDDGDGKIVIDNGTICRVKKS 77
Query: 95 NSKHKKFVYWPKDTNALVPLV 33
++FVY ++LVPL+
Sbjct: 78 TKSTERFVY--LSGHSLVPLI 96
>UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF95
LEF-4 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 480
Score = 32.3 bits (70), Expect = 2.1
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = -3
Query: 242 LLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWP 63
+LY+ L ++ N AQ Y ++YD N RTRI ++S+VKK + + V
Sbjct: 18 VLYR-LKGWLDANLCDAQSYVEVYDTNDVRTRI----YDGGVMSTVKKRLVESGRVVVMV 72
Query: 62 KDTNALVPLVWRESKE 15
D VP++ RE E
Sbjct: 73 GDN--FVPMINRECHE 86
>UniRef50_A4MJY9 Cluster: Nuclease (RecB family)-like protein; n=1;
Petrotoga mobilis SJ95|Rep: Nuclease (RecB family)-like
protein - Petrotoga mobilis SJ95
Length = 366
Score = 31.9 bits (69), Expect = 2.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 221 SYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYW 66
SY VP Y YFD+ + NG + +S N ++ ++ N+ K YW
Sbjct: 13 SYFVPTYKRQGSYFDI-NINGLKVEANYESINNGVVKIIRMGNNFKKS--YW 61
>UniRef50_Q0ZCD7 Cluster: RNA-directed DNA polymerase; n=1; Populus
trichocarpa|Rep: RNA-directed DNA polymerase - Populus
trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa)
Length = 399
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -3
Query: 233 KILNSYIVPNYSLAQQYFDLYDENG-FRTRIPIQSACNNIISSVKKTNSKHKKFVYWP-- 63
K LN V N+ Y Y N F+ IP AC N +SS K T ++ YWP
Sbjct: 211 KFLNE--VKNFYWDDPYLFKYCPNQIFQRCIPDNEACANHLSSKKTTAKILQRGFYWPTM 268
Query: 62 -KDTNA 48
KDT+A
Sbjct: 269 FKDTHA 274
>UniRef50_Q600Q5 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 232)
Length = 420
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 110 SVKKTNSKHKKFVYWPKDTNALVPLVWRESKE 15
+V+K +SKH WP+ + + LVWR K+
Sbjct: 168 TVEKPDSKHDFIEIWPRKNSKNIQLVWRWGKK 199
>UniRef50_Q4HJ49 Cluster: Putative uncharacterized protein; n=1;
Campylobacter lari RM2100|Rep: Putative uncharacterized
protein - Campylobacter lari RM2100
Length = 560
Score = 30.7 bits (66), Expect = 6.5
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 233 KILNSYIVP-NYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKD 57
K LN ++ +Y YF+ EN + I+ NI + +K N KHK + Y+PK+
Sbjct: 365 KELNIFLSDYSYKTYLSYFNKLSENIKYESMKIEQILYNI-NIIK--NQKHKTYKYFPKN 421
Query: 56 TNALVPLV 33
L+ L+
Sbjct: 422 KEELIDLI 429
>UniRef50_A1ZZ64 Cluster: Glycosyl transferase, group 2 family
protein; n=1; Microscilla marina ATCC 23134|Rep:
Glycosyl transferase, group 2 family protein -
Microscilla marina ATCC 23134
Length = 381
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 182 FDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPL 36
F Y N F T+I I+ I S+ K +KF++W A+ PL
Sbjct: 310 FGGYSANAFLTQISIKCIVEFIFLSLVLNYLKKRKFIWWIPIVQAIYPL 358
>UniRef50_A2EAQ1 Cluster: EF hand family protein; n=1; Trichomonas
vaginalis G3|Rep: EF hand family protein - Trichomonas
vaginalis G3
Length = 394
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 248 FFLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 105
FF L I V NY ++ Y L DE GF T I C+ I+ ++
Sbjct: 310 FFKLVDIDGDGYVSNYDISYFYKSLVDETGF-TEINFDRFCSEILDTI 356
>UniRef50_A0C307 Cluster: Chromosome undetermined scaffold_146, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_146, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 5254
Score = 30.7 bits (66), Expect = 6.5
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = -3
Query: 206 NYSLAQQYFDLYD--ENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPLV 33
N L YFDLY + GF IP+ S CN I+S + V W +D + V +
Sbjct: 3098 NIDLRIAYFDLYGNLQTGF---IPVSSICNRPINSQINKIADGSILVSWYQDQDIYVQKL 3154
Query: 32 WRESKEIKLP 3
R+ LP
Sbjct: 3155 DRKGVIYPLP 3164
>UniRef50_Q64XP9 Cluster: Dipeptidyl peptidase IV; n=10;
Bacteroidales|Rep: Dipeptidyl peptidase IV - Bacteroides
fragilis
Length = 736
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/59 (25%), Positives = 23/59 (38%)
Frame = -3
Query: 227 LNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTN 51
+N + N +YF + + S N+I V N + K F+ W DTN
Sbjct: 340 INENVFDNIQFYPEYFSFVSDKSGYPHLYWYSMNGNLIKQVTNGNYEVKNFIGWNPDTN 398
>UniRef50_A4C162 Cluster: Rhodanese-related sulfurtransferase; n=1;
Polaribacter irgensii 23-P|Rep: Rhodanese-related
sulfurtransferase - Polaribacter irgensii 23-P
Length = 276
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = -3
Query: 236 YKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKD 57
Y + N +PN + Y D+ + R+ I + + +K KH K + P
Sbjct: 137 YALGNFKALPNDDFIKSYQDIINNVNTRSFTVIDARSEGRFNGTEKEPRKHLKSGHIPNS 196
Query: 56 TNALVPLVWRESK 18
N PLV E K
Sbjct: 197 VNIPYPLVLDEGK 209
>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
n=2; Plasmodium|Rep: Putative uncharacterized protein
MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
Length = 4894
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -3
Query: 248 FFLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKK 78
FFL KILN ++ N + Q + +Y + F T + NN+I KK N++ K+
Sbjct: 3783 FFLSLKILNRLLLKNRKMNQMNYIIY--HFFITLHVVHYIKNNMIMQNKKGNTEKKQ 3837
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,918,762
Number of Sequences: 1657284
Number of extensions: 3852597
Number of successful extensions: 11061
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11059
length of database: 575,637,011
effective HSP length: 61
effective length of database: 474,542,687
effective search space used: 9965396427
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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