Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc2c17
         (250 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.21 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.28 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.28 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   3.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    19   6.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   6.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.2 bits (50), Expect = 0.21
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 146 YECESRFRRTNRNIVVPANN*EQYKNLKFY 235
           Y+CE   R   +    P N+ EQY N  +Y
Sbjct: 64  YDCEGVIRHHGQWNYSPDNHFEQYPNPTYY 93


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 113 SSVKKTNSKHK-KFVYWPKDTNALVPLV 33
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 0.28
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 113 SSVKKTNSKHK-KFVYWPKDTNALVPLV 33
           S V+  N K   KF +WP   NAL+ L+
Sbjct: 36  SLVRVENGKKVFKFAWWPLTRNALLVLI 63


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 116 ISSVKKTNSKHKKFVYWPKDTNALVPL 36
           ++ VKK   K  + V +PKD + L  L
Sbjct: 185 VNHVKKILEKETQTVAFPKDNHFLALL 211


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 101  KTNSKHKKFVYW 66
            +TN +H   VYW
Sbjct: 1005 ETNDQHSLVVYW 1016


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 242 LLYKILNSYIVPNYSLA 192
           +LY  +NSY VP  +++
Sbjct: 389 ILYANMNSYSVPEPTIS 405


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 119 IISSVKKTNSKHKKFVYWP 63
           ++ S+K+ N    +F  WP
Sbjct: 197 LVCSIKELNMIFNEFFGWP 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,292
Number of Sequences: 336
Number of extensions: 1131
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)