Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc2c16
(656 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38... 130 3e-29
UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|R... 36 0.86
UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide polyme... 34 3.5
UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1; Te... 33 6.0
UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2... 33 6.0
UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7... 33 6.0
UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus Carson... 33 8.0
UniRef50_A6LE35 Cluster: Capsular polysaccharide repeat unit tra... 33 8.0
UniRef50_Q8I362 Cluster: Putative uncharacterized protein PFI043... 33 8.0
UniRef50_Q7PDU3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 33 8.0
UniRef50_Q24DS3 Cluster: Cation channel family protein; n=1; Tet... 33 8.0
UniRef50_O61610 Cluster: PaxC transcription factor; n=6; Anthozo... 33 8.0
>UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38
3'region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized
9.4 kDa protein in PE38 3'region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 81
Score = 130 bits (314), Expect = 3e-29
Identities = 64/78 (82%), Positives = 67/78 (85%), Gaps = 5/78 (6%)
Frame = -3
Query: 591 MDSSNCIKIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKFIINHNHE--QVDETNK 418
MDSSNCIKIDVKY MPLHYQCD NADK+VVNAYD IDVDPNK+FIINHNHE QV+ETNK
Sbjct: 1 MDSSNCIKIDVKYDMPLHYQCDNNADKDVVNAYDTIDVDPNKRFIINHNHEQQQVNETNK 60
Query: 417 QEVVDKT---DATTYNSC 373
Q VVDKT D TYNSC
Sbjct: 61 Q-VVDKTFINDTATYNSC 77
>UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|Rep:
Diguanylate cyclase - Clostridium beijerinckii NCIMB
8052
Length = 356
Score = 35.9 bits (79), Expect = 0.86
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 355 HLNFYDARIVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVTL 534
H D RI+ ++ I FI +F+I++ F G+N S+I N+FI + +
Sbjct: 60 HNTIIDFRIIPVIITSIYGGFISTFISVFIIILFRLTFFGINYSSLITSGNLFILLIIFT 119
Query: 535 IM*RHMV-FYIYFNTITTIHVKSFLI 609
I+ R+ + F + +T +++ S +I
Sbjct: 120 IISRYKINFSKKYFLMTIVNIISTII 145
>UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide
polymerase; n=1; Bacteroides fragilis|Rep: Putative
capsular polysaccharide polymerase - Bacteroides
fragilis
Length = 345
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 352 YHLNFYDARIVCCCVSFIDD-FLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNV 510
Y L ++ I C S + F +C LF I ++++VGV+ + ++IYN+
Sbjct: 4 YFLIYFFLLIFCSLGSVTKNRFFLICVFILFSIFSGFRYYVGVDYVNYVKIYNL 57
>UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1;
Tetrahymena thermophila SB210|Rep: ABC transporter family
protein - Tetrahymena thermophila SB210
Length = 1428
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +1
Query: 397 SFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYN 507
SF D FLF+ + LF+++++ F+V V++ S R++N
Sbjct: 891 SFKDTFLFLTMLQLFLMILSSVFYVLVSLLSCYRLFN 927
>UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2;
Candida albicans|Rep: Potential M1 family aminopeptidase
- Candida albicans (Yeast)
Length = 459
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -3
Query: 540 HYQCDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTD 394
HY+ DIN K N I +D N I+H ++Q E KQE +K +
Sbjct: 20 HYKLDINHQKPNFNGVAIITIDKNHHQQISHKYKQ-SEKEKQEKEEKEE 67
>UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7;
Eumetazoa|Rep: Eye-specific diacylglycerol kinase -
Drosophila melanogaster (Fruit fly)
Length = 1457
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 525 INADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDA 391
+ A + ++ +AI V+P + N +HE+VD +N + VD D+
Sbjct: 406 VRARRRSISRQEAIFVEPTGNSLENVSHEEVDNSNTKSSVDTADS 450
>UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus
Carsonella ruddii PV|Rep: Putative GTPase - Carsonella
ruddii (strain PV)
Length = 254
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +1
Query: 412 FLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVTLIM*RHMVFYIYF 570
F++ FI FV+ IN I+ + +IY + I +N+ I+ + + FY YF
Sbjct: 141 FVYKFFIKSFVLNINSNNLDVFKINFISKIYLIIINLNIIHILIKIIKFYFYF 193
>UniRef50_A6LE35 Cluster: Capsular polysaccharide repeat unit
transporter; n=1; Parabacteroides distasonis ATCC
8503|Rep: Capsular polysaccharide repeat unit
transporter - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 486
Score = 32.7 bits (71), Expect = 8.0
Identities = 12/74 (16%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +1
Query: 379 IVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNV----TLIM*R 546
++C + +++C D+ +++ K+ + I +I ++++ +C+ V +
Sbjct: 294 VICFLTFLMSGVMYICASDIILLLYGDKWVDAIEIFKIIGLFSISLCLPVVFDTVMTATN 353
Query: 547 HMVFYIYFNTITTI 588
M Y++ N ++ I
Sbjct: 354 RMTLYLWINIVSNI 367
>UniRef50_Q8I362 Cluster: Putative uncharacterized protein PFI0435c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFI0435c - Plasmodium falciparum (isolate 3D7)
Length = 1012
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 594 NMDSSNCIKIDVKYHMPLHYQCDINADKNVVNAYDAIDVDPNKKF 460
N D+ NCI+ID+ H + C + DK V Y +++ PN F
Sbjct: 916 NFDTDNCIEIDMSIHA---FICPKSFDKTNVKCY--VEISPNMNF 955
>UniRef50_Q7PDU3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=1;
Plasmodium yoelii yoelii|Rep: ERYTHROCYTE MEMBRANE
PROTEIN PFEMP3 - Plasmodium yoelii yoelii
Length = 918
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 516 DKNVVNAYDAIDVDPNKKFIIN-HNHEQVDETNKQEVVDKTD 394
+K ++N Y+ I D N++ I+N HN + DE N ++++ ++
Sbjct: 17 EKEIINIYNDIKDDENQREIVNIHNDIKEDENNNVDIINLSE 58
>UniRef50_Q24DS3 Cluster: Cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: Cation channel family
protein - Tetrahymena thermophila SB210
Length = 1367
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 406 DDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNV 528
D FL + I LF +++N + F G+NI + +YNV I ++
Sbjct: 199 DSFLSL-LIMLFTLLLNLQLFFGMNISNFYLLYNVLIIFSI 238
>UniRef50_O61610 Cluster: PaxC transcription factor; n=6;
Anthozoa|Rep: PaxC transcription factor - Acropora
millepora (Coral)
Length = 464
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = -3
Query: 516 DKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTYNS 376
+ + +DA D D N++ INH++E VD T+++ + + + + YNS
Sbjct: 260 ETEAIQEFDAEDRDSNQRSNINHSNENVD-TDRKAMKNNSGNSGYNS 305
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,679,684
Number of Sequences: 1657284
Number of extensions: 8458920
Number of successful extensions: 19574
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19523
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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